Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1222
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical p... 30 1.0
Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z92973-5|CAI79257.1| 104|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 28 5.5
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 28 5.5
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 28 5.5
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 7.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 7.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 7.3
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 7.3
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 7.3
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 7.3
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 27 9.6
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 27 9.6
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 9.6
U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 9.6
AC024136-5|AAF35964.4| 257|Caenorhabditis elegans Hypothetical ... 27 9.6
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 27 9.6
>Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 211 FDVLIAGGLLLPGGSCRWTANRPRPTPA 294
FD + GGLLL G RW ++R TPA
Sbjct: 115 FDPWLGGGLLLEGYGERWKSHRKMLTPA 142
>Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 211 FDVLIAGGLLLPGGSCRWTANRPRPTPA 294
FD + GGLLL G RW ++R TPA
Sbjct: 115 FDPWLGGGLLLEGYGERWKSHRKMLTPA 142
>Z92973-5|CAI79257.1| 104|Caenorhabditis elegans Hypothetical
protein Y6G8.6 protein.
Length = 104
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 485 YRSTVQSCAASLMRLFGIEAFQVDQNLFHFLFEHFFQVLVPTH 357
Y+ST+ C+ + + G E F DQN F H +L T+
Sbjct: 55 YKSTINGCS---LEIGGKEKFFEDQNFMELFFSHLIIILSLTN 94
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 485 YRSTVQSCAASLMRLFGIEAFQVDQNLFHFLFEHFFQVLVPTHQFHEYL 339
Y+ST+ C+ + + G E +QN F F H +L T+ F YL
Sbjct: 55 YKSTINGCS---LEIGGKEEIFKNQNFMEFFFSHLTIILSSTN-FISYL 99
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 140 STQPTST*TRPDQNSTTDAMAKSYSMYSLLAACCCRAVRVD 262
STQ T T QNS +YS +L CC VR+D
Sbjct: 731 STQQPMTCTPNSQNSCPLGFQCTYSSIRMLYFCCRDIVRID 771
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 422 ERLRSRTAASSWPRMTALWIGNGCVPPSVCLVLV 523
E R TA W M A WIG CV ++ +LV
Sbjct: 145 EEQRGTTAGCMWTVMIA-WIGYNCVLVTIAAILV 177
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 38 VNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAK 205
V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ K
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQK 376
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 422 ERLRSRTAASSWPRMTALWIGNGCVPPSVCLVLV 523
E R TA W M A WIG CV ++ +LV
Sbjct: 145 EEQRGTTAGCMWTVMIA-WIGYNCVLVTIAAILV 177
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 422 ERLRSRTAASSWPRMTALWIGNGCVPPSVCLVLV 523
E R TA W M A WIG CV ++ +LV
Sbjct: 145 EEQRGTTAGCMWTVMIA-WIGYNCVLVTIAAILV 177
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 306 NEDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPEQPHQ 452
+EDMDT E +++K +Y+EK+FE + L FD + ++
Sbjct: 878 SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYE 924
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 83 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 190
T T +AT P +TQPT+T T P +TT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 83 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 190
T T +AT P +TQPT+T T P +TT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 83 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 190
T T +AT P +TQPT+T T P +TT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 20 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 121
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 20 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 121
KN+Y N + +E K R +S W RVW
Sbjct: 493 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 526
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 20 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 121
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 20 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 121
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 324 MRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPE 440
M + + FVK MRR + +E+ K+V+ G DP+
Sbjct: 88 MSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPK 126
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 276 AIRRPSTRTARQQQAASNEYIEYDFAIASVVE 181
+I+RP+ + + S EY+++D A S VE
Sbjct: 396 SIKRPTKEKVKASRPTSTEYLDFDSASESDVE 427
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 276 AIRRPSTRTARQQQAASNEYIEYDFAIASVVE 181
+I+RP+ + + S EY+++D A S VE
Sbjct: 399 SIKRPTKEKVKASRPTSTEYLDFDSASESDVE 430
>U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical
protein K04G7.1 protein.
Length = 558
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 309 HWRRRCRCWSWAIRRPSTRTARQQQAAS 226
HWR RC+C+S A R + +++A+
Sbjct: 75 HWRARCKCFSMADDRETLLYYNPEKSAN 102
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 276 AIRRPSTRTARQQQAASNEYIEYDFAIASVVE 181
+I+RP+ + + S EY+++D A S VE
Sbjct: 399 SIKRPTKEKVKASRPTSTEYLDFDSASESDVE 430
>AC024136-5|AAF35964.4| 257|Caenorhabditis elegans Hypothetical
protein F54A3.2 protein.
Length = 257
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 479 STVQSCAASLMRLFGIEAFQVDQNLFHFLFEHFFQVLVPTHQF 351
+T + L+ FGI + + + L HFL+ +F + P QF
Sbjct: 175 TTSERLQKDLIDWFGIPSPESKKTLLHFLYAYFCRQCTPDIQF 217
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 324 MRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPE 440
M + + FVK MRR + +E+ K+V+ G DP+
Sbjct: 88 MSLYSRTFVKQMRRCEEMERKLRFLEKQVITCKPGLDPK 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,023
Number of Sequences: 27780
Number of extensions: 356607
Number of successful extensions: 1330
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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