Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1222
(578 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.9
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 3.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 3.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 3.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 3.8
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 5.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 5.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.8
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 1.6
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 464 MTALWIGNGCVPPSVCLVLVNEH 532
++ +W+G C+ L++ NEH
Sbjct: 162 VSLVWLGAACISLPPLLIMGNEH 184
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 4 MSQKVEKPVLSGQRIKT 54
M QK+EKPVLS T
Sbjct: 314 MLQKLEKPVLSSSTTTT 330
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 569 PAQSPAPGCPSADVRSPGPSTRM 501
P+Q P PG P S PS M
Sbjct: 42 PSQGPPPGGPPGAPPSQNPSQMM 64
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 139 LDAAYKYLDSAGSKLDYRRYGEVIFDVLI 225
+D Y LDS ++ YG + DV++
Sbjct: 163 MDLHYYPLDSQNCTVEIESYGYTVLDVVM 191
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 3.8
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -1
Query: 569 PAQSPAPGCPSADVRSPGPSTRMEARIRYRSTVQSCAASLMRLFGIEAFQVDQNLFHFLF 390
P + P PG P +V+ +++A ++ T A M+LFG + + + +
Sbjct: 22 PKEEPGPGLPGQEVKQSFLKNQLQA--LFQPTDNKLA---MKLFGSKKALMKERIRQKAA 76
Query: 389 EHFFQVLVPTHQFHEY 342
H+ V+ P F Y
Sbjct: 77 GHW--VIHPCSSFRFY 90
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 3.8
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -1
Query: 569 PAQSPAPGCPSADVRSPGPSTRMEARIRYRSTVQSCAASLMRLFGIEAFQVDQNLFHFLF 390
P + P PG P +V+ +++A ++ T A M+LFG + + + +
Sbjct: 22 PKEEPGPGLPGQEVKQSFLKNQLQA--LFQPTDNKLA---MKLFGSKKALMKERIRQKAA 76
Query: 389 EHFFQVLVPTHQFHEY 342
H+ V+ P F Y
Sbjct: 77 GHW--VIHPCSSFRFY 90
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 3.8
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -1
Query: 569 PAQSPAPGCPSADVRSPGPSTRMEARIRYRSTVQSCAASLMRLFGIEAFQVDQNLFHFLF 390
P + P PG P +V+ +++A ++ T A M+LFG + + + +
Sbjct: 22 PKEEPGPGLPGQEVKQSFLKNQLQA--LFQPTDNKLA---MKLFGSKKALMKERIRQKAA 76
Query: 389 EHFFQVLVPTHQFHEY 342
H+ V+ P F Y
Sbjct: 77 GHW--VIHPCSSFRFY 90
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 1 CMSQKVEKPVLSGQRIKTRKRDEKE 75
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 1 CMSQKVEKPVLSGQRIKTRKRDEKE 75
C++ +++ + +R +T++RD+ E
Sbjct: 170 CLAMGMKREAVQEERQRTKERDQSE 194
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +1
Query: 4 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 135
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1640 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1683
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +1
Query: 4 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGG 135
+ ++++P+ Q + ++E+Y + AL Q GG
Sbjct: 1636 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGG 1679
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 576 TLSSTKSSARLSFSRCSFTRTKHTDGGTH 490
TL++ ++ + S+CS T +++G TH
Sbjct: 350 TLNTKCNTLERTPSKCSQTSVHYSNGQTH 378
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 6 ESEGRKTSIIGSTD 47
ESE R+ S +GST+
Sbjct: 371 ESENRRNSCLGSTE 384
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 197 MAKSYSMYSLLAACCCRAVRVDGRRIAQDQH 289
+ K+Y MY++ + C + + G R+ + H
Sbjct: 661 LGKAYLMYAIAGSQCFINIWLLGSRLDWEDH 691
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 547 VVLQQMFVHQDQAHGWRHASVTDPQ 473
V Q + +D A HASVTD +
Sbjct: 412 VTSQYKNIREDDARHIPHASVTDSE 436
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,893
Number of Sequences: 438
Number of extensions: 4779
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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