Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1221
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 29 2.2
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 29 2.2
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 29 2.9
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 29 2.9
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 29 2.9
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 29 3.8
Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL110490-8|CAB54444.2| 602|Caenorhabditis elegans Hypothetical ... 28 5.0
AF025379-1|AAC14017.1| 602|Caenorhabditis elegans acetylcholine... 28 5.0
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 6.7
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical ... 28 6.7
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 378 HVVSDFGSRTPPQTHPEYQHQK 313
H+ SDF +TP TH H+K
Sbjct: 185 HIASDFNQKTPQSTHATSNHRK 206
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 378 HVVSDFGSRTPPQTHPEYQHQK 313
H+ SDF +TP TH H+K
Sbjct: 185 HIASDFNQKTPQSTHATSNHRK 206
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 3 SVWFVV*RLNLHKHVNLDLKLEQNIIIQCTNSSGCSVPNIIAL 131
SVW R+N HK V L +E + + TN G SV ++ L
Sbjct: 1014 SVWHYAARVNSHKTVGLFKMIESKGVRRETNDDGRSVLHVATL 1056
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 3 SVWFVV*RLNLHKHVNLDLKLEQNIIIQCTNSSGCSVPNIIAL 131
SVW R+N HK V L +E + + TN G SV ++ L
Sbjct: 1052 SVWHYAARVNSHKTVGLFKMIESKGVRRETNDDGRSVLHVATL 1094
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 3 SVWFVV*RLNLHKHVNLDLKLEQNIIIQCTNSSGCSVPNIIAL 131
SVW R+N HK V L +E + + TN G SV ++ L
Sbjct: 1014 SVWHYAARVNSHKTVGLFKMIESKGVRRETNDDGRSVLHVATL 1056
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 130 WKISNFISLSTSIVFVFRVSRSLFIKQTVYPRTRYK*CMVHRLLEASNVNSVTG 291
W+ F+SL SI +++ F+K Y Y H +E NS+ G
Sbjct: 823 WEPREFVSLLISIYL--KLNMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVG 874
>Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical
protein T05H10.5b protein.
Length = 984
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 130 WKISNFISLSTSIVFVFRVSRSLFIKQTVYPRTRYK*CMVHRLLEASNVNSVTG 291
W+ F+SL SI +++ F+K Y Y H +E NS+ G
Sbjct: 828 WEPREFVSLLISIYL--KLNMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVG 879
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 130 WKISNFISLSTSIVFVFRVSRSLFIKQTVYPRTRYK*CMVHRLLEASNVNSVTG 291
W+ F+SL SI +++ F+K Y Y H +E NS+ G
Sbjct: 824 WEPREFVSLLISIYL--KLNMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVG 875
>AL110490-8|CAB54444.2| 602|Caenorhabditis elegans Hypothetical
protein Y48B6A.7 protein.
Length = 602
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 280 YLHYWLPEDDAPCTIYIWFWG 218
YL+ W P D T+ +WF+G
Sbjct: 117 YLNIWAPADAYNLTVMVWFFG 137
>AF025379-1|AAC14017.1| 602|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 602
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 280 YLHYWLPEDDAPCTIYIWFWG 218
YL+ W P D T+ +WF+G
Sbjct: 117 YLNIWAPADAYNLTVMVWFFG 137
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 469 LCGQSAIRHASHGPLYNSTHMIIDAIANKQAYPE 570
+CG S RH S+ YN + I+ + + +PE
Sbjct: 108 ICGVSPSRHLSYNHFYNQSAAEIEEMLRTRQFPE 141
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 469 LCGQSAIRHASHGPLYNSTHMIIDAIANKQAYPE 570
+CG S RH S+ YN + I+ + + +PE
Sbjct: 76 ICGVSPSRHLSYNHFYNQSAAEIEEMLRTRQFPE 109
>AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical
protein T21G5.1 protein.
Length = 579
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 196 LFIKQTVYPRTRYK*-CMVHRLLEASNVNSVTGTAGKMCRFLVLVFWVC 339
+F+ + V P + Y C V +L +A +S T T + FLV+VFW C
Sbjct: 203 VFLARMVDPTSEYVLDCAVKKLKQA---DSQTLTNFNILNFLVIVFWGC 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,834,272
Number of Sequences: 27780
Number of extensions: 386128
Number of successful extensions: 1079
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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