Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1220
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   5.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 83  FQDCDIDNSYYEIVYILKVCVRIFFW 6
           FQ  + DN      Y++ + V +FFW
Sbjct: 82  FQQFECDNEPKLRHYLIFIFVNVFFW 107


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 4/14 (28%), Positives = 11/14 (78%)
 Frame = -2

Query: 47  IVYILKVCVRIFFW 6
           ++Y+L +C  +++W
Sbjct: 109 VLYVLTLCYAVYYW 122


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 174 DHLLLTFQCTRVCLLKQEYFSTIFFLY 254
           D + L+F+CT++C   +E   T F  Y
Sbjct: 149 DLIFLSFRCTKLC---KEANKTAFLWY 172


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 307 KVFAQPNNVNVFVVMDV 257
           K+F Q  N NV VV+DV
Sbjct: 6   KMFNQEQNNNVPVVLDV 22


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -2

Query: 104 QQQITYEFQDCDIDNSYY 51
           ++++T +F D ++D SY+
Sbjct: 561 REKLTMKFHDGEVDASYF 578


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 467 YNLMKII**IFFALDELYVNE 405
           YNL   +  +  ALD L++N+
Sbjct: 185 YNLFSFVPLVVNALDHLFLND 205


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 467 YNLMKII**IFFALDELYVNE 405
           YNL   +  +  ALD L++N+
Sbjct: 141 YNLFSFVPLVVNALDHLFLND 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,121
Number of Sequences: 336
Number of extensions: 3014
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)