Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1220
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90857-1|CAA62368.1|  569|Homo sapiens -14 protein.                    31   2.9  
DQ431198-6|ABD95907.1|  569|Homo sapiens -14 gene protein protein.     31   2.9  
BC012825-1|AAH12825.1|  390|Homo sapiens chromosome 16 open read...    31   2.9  
BC004185-1|AAH04185.1|  390|Homo sapiens chromosome 16 open read...    31   2.9  

>X90857-1|CAA62368.1|  569|Homo sapiens -14 protein.
          Length = 569

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 231 NILASTNKHEYIGKLIISDRPNGADVRKLNRKIRHFRSQH 112
           N+LAS ++HE    L +    N  D+R   R + +FR +H
Sbjct: 485 NLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRH 524


>DQ431198-6|ABD95907.1|  569|Homo sapiens -14 gene protein protein.
          Length = 569

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 231 NILASTNKHEYIGKLIISDRPNGADVRKLNRKIRHFRSQH 112
           N+LAS ++HE    L +    N  D+R   R + +FR +H
Sbjct: 485 NLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRH 524


>BC012825-1|AAH12825.1|  390|Homo sapiens chromosome 16 open reading
           frame 35 protein.
          Length = 390

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 231 NILASTNKHEYIGKLIISDRPNGADVRKLNRKIRHFRSQH 112
           N+LAS ++HE    L +    N  D+R   R + +FR +H
Sbjct: 306 NLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRH 345


>BC004185-1|AAH04185.1|  390|Homo sapiens chromosome 16 open reading
           frame 35 protein.
          Length = 390

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 231 NILASTNKHEYIGKLIISDRPNGADVRKLNRKIRHFRSQH 112
           N+LAS ++HE    L +    N  D+R   R + +FR +H
Sbjct: 306 NLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRH 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,593,399
Number of Sequences: 237096
Number of extensions: 1451963
Number of successful extensions: 2554
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2554
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)