Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1219
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 135 5e-33
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 134 6e-33
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 134 6e-33
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 77 1e-15
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 67 1e-12
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 55 6e-09
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 44 2e-05
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 38 8e-04
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.26
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 29 0.46
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 1.9
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 3.2
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 26 4.3
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 5.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.5
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 25 7.5
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 7.5
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 25 9.9
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 135 bits (326), Expect = 5e-33
Identities = 83/153 (54%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSN---ML 273
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GK +L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 274 GYWTN*RXXXXXXXXXXXXXXXXKLASTMLPSLMLLDTEISSRT*SQEPLRLIAPVLIVA 453
R K T++ + D + T + + VLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ---ADCAVLIIG 117
Query: 454 AGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
GTGEFEAGI K+GQTR HALLA+TLGVKQLI
Sbjct: 118 GGTGEFEAGI-SKDGQTREHALLAYTLGVKQLI 149
Score = 129 bits (311), Expect = 3e-31
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G GSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQA 109
Query: 429 DCA 437
DCA
Sbjct: 110 DCA 112
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 134 bits (325), Expect = 6e-33
Identities = 82/153 (53%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSN---ML 273
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GK +L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 274 GYWTN*RXXXXXXXXXXXXXXXXKLASTMLPSLMLLDTEISSRT*SQEPLRLIAPVLIVA 453
R K T++ + D + T + + +LI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ---ADCAILIIG 117
Query: 454 AGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
GTGEFEAGI K+GQTR HALLA+TLGVKQLI
Sbjct: 118 GGTGEFEAGI-SKDGQTREHALLAYTLGVKQLI 149
Score = 129 bits (311), Expect = 3e-31
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G GSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQA 109
Query: 429 DCA 437
DCA
Sbjct: 110 DCA 112
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 134 bits (325), Expect = 6e-33
Identities = 82/153 (53%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSN---ML 273
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GK +L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 274 GYWTN*RXXXXXXXXXXXXXXXXKLASTMLPSLMLLDTEISSRT*SQEPLRLIAPVLIVA 453
R K T++ + D + T + + +LI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ---ADCAILIIG 117
Query: 454 AGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
GTGEFEAGI K+GQTR HALLA+TLGVKQLI
Sbjct: 118 GGTGEFEAGI-SKDGQTREHALLAYTLGVKQLI 149
Score = 129 bits (311), Expect = 3e-31
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G GSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQA 109
Query: 429 DCA 437
DCA
Sbjct: 110 DCA 112
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 77.4 bits (182), Expect = 1e-15
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +3
Query: 246 NG*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 425
+G GSF YAW+LD + ER RG+T+D+A FE+ K I DAPGHRDFI MI G S
Sbjct: 219 SGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASS 278
Query: 426 ADCA 437
AD A
Sbjct: 279 ADFA 282
Score = 49.6 bits (113), Expect = 3e-07
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +1
Query: 115 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 255
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GK
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGK 221
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 439 VLIVAAGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
VL+V + FE G FL+NGQTR HA L LG+ +++
Sbjct: 283 VLVVDSSQNNFERG-FLENGQTREHAYLLRALGISEIV 319
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 67.3 bits (157), Expect = 1e-12
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +1
Query: 115 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 258
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK+
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKE 283
Score = 61.7 bits (143), Expect = 7e-11
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +3
Query: 219 REVREGGPGNG*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 398
RE +E G S+ +W LD ERE+G T+++ FET +++DAPGH+ ++
Sbjct: 275 REAKEAGKE----SWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYV 330
Query: 399 KNMITGTSQAD 431
NMI G SQAD
Sbjct: 331 TNMINGASQAD 341
Score = 42.7 bits (96), Expect = 3e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 439 VLIVAAGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
VL+++A GEFEAG F + GQTR HA+LA T G+ L+
Sbjct: 344 VLVISARRGEFEAG-FERGGQTREHAVLARTQGINHLV 380
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 55.2 bits (127), Expect = 6e-09
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 81 GQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATM 140
Query: 429 DCA 437
D A
Sbjct: 141 DGA 143
Score = 35.1 bits (77), Expect = 0.007
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 109 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 195
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 499 QTR*HALLAFTLGVKQLI 552
QTR H LLA +GVKQ++
Sbjct: 156 QTREHLLLARQVGVKQIV 173
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +3
Query: 276 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCACA 443
V+D L AER+RGITI+ A F + +ID PGH DF + + D A A
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVA 122
Score = 28.7 bits (61), Expect = 0.61
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCG 198
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 38.3 bits (85), Expect = 8e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 279 LDKLKAERERGITIDI----ALWKFETSKYYVTIIDAPGHRDF 395
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDF 137
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 210
N VI H+D GKST + ++ G I++
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 198
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 198
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.26
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 282 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 404
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 29.1 bits (62), Expect = 0.46
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGI 204
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 19/58 (32%)
Frame = +3
Query: 279 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDF 395
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDF 158
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.1 bits (57), Expect = 1.9
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -1
Query: 422 RGSCDHVLDEISVSRSINDGNIVLASFELPE---SNIDCDTTLTLSL*FVQYPSIFEGSL 252
R S +LDE+ S S ++ + EL E S++ C + + F S+FE S+
Sbjct: 26 RFSAQQLLDELKDSYS--SPSVAIQLLELNEQAFSSLGCKLDIHIVQHFSL--SLFETSV 81
Query: 251 PISWASFSN 225
++W SFSN
Sbjct: 82 GMNWKSFSN 90
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 354 YYVTIIDAPGHRDFIKNMITGTSQADCA 437
Y + +ID+PGH DF + + + D A
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGA 121
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 4.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 425 LRGSCDHVLDEISVSRSINDGNIV---LASFELPESNIDCDTTLTLSL*FVQYPSIFEGS 255
L +H + S++ G + L F++P S + D+TLT L + S
Sbjct: 83 LLSDTEHPTLAVIYPASVSQGGVASLELRLFDIPTSLLRSDSTLTAKLLVASFGETIPFS 142
Query: 254 LPISWASFS 228
LP+ S +
Sbjct: 143 LPLGQLSIN 151
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 357 YVTIIDAPGHRDFIKNMITGTSQADCA 437
+V+ +D PGH + M+ G + D A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAA 135
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 97 PKMGKEKTHINIVVIGHVDSGKST 168
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 7.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 244 PGPPSRTSRWYVCQYHHIC 188
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 467 NSKLVSS*RTVKPVSMPCSLSPSVLNSSL 553
+SKL +S RT +M S+SP+ NSS+
Sbjct: 104 SSKLAASSRTASYQAMSYSVSPTSTNSSV 132
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.0 bits (52), Expect = 7.5
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 309 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQAD 431
GIT I + F+ ++T +D PGH F G + AD
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIAD 245
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.6 bits (51), Expect = 9.9
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Frame = +1
Query: 133 VVIGHVDSGKSTTTGHLIYKCG-----GI-----DKRTIEK--FEKEAQEMGKDPSNMLG 276
+V+GH GK+T +Y+ G GI +R + K E+ + E+ P ++ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCG 104
Query: 277 Y 279
Y
Sbjct: 105 Y 105
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 413 CDHVLDEISVSRSINDGNIVLASFEL 336
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,197,511
Number of Sequences: 5004
Number of extensions: 41923
Number of successful extensions: 170
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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