Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1219
(554 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 146 1e-37
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 144 5e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 121 4e-30
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 89 4e-20
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.39
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.90
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 4.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 4.8
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 6.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 146 bits (354), Expect = 1e-37
Identities = 91/153 (59%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSN---ML 273
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK +L
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 274 GYWTN*RXXXXXXXXXXXXXXXXKLASTMLPSLMLLDTEISSRT*SQEPLRLIAPVLIVA 453
R K T++ + D + T + + VLIVA
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ---ADCAVLIVA 117
Query: 454 AGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
AGTGEFEAGI KNGQTR HALLAFTLGVKQLI
Sbjct: 118 AGTGEFEAGI-SKNGQTREHALLAFTLGVKQLI 149
Score = 135 bits (326), Expect = 3e-34
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 109
Query: 429 DCA 437
DCA
Sbjct: 110 DCA 112
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 144 bits (349), Expect = 5e-37
Identities = 85/150 (56%), Positives = 91/150 (60%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSNMLGYW 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 TN*RXXXXXXXXXXXXXXXXKLASTMLPSLMLLDTEISSRT*SQEPLRLIAPVLIVAAGT 462
+ + A + + + + VLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 463 GEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
GEFEAGI KNGQTR HALLAFTLGVKQLI
Sbjct: 121 GEFEAGI-SKNGQTREHALLAFTLGVKQLI 149
Score = 134 bits (323), Expect = 7e-34
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 249 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 428
G GSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQA 109
Query: 429 DCA 437
DCA
Sbjct: 110 DCA 112
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 121 bits (292), Expect = 4e-30
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +3
Query: 273 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 437
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 55
Score = 65.7 bits (153), Expect = 3e-13
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = +1
Query: 439 VLIVAAGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
VLIVAAGTGEFEAGI KNGQTR HALLAFTLGVKQLI
Sbjct: 56 VLIVAAGTGEFEAGIS-KNGQTREHALLAFTLGVKQLI 92
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 88.6 bits (210), Expect = 4e-20
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 321 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 437
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 39
Score = 65.7 bits (153), Expect = 3e-13
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = +1
Query: 439 VLIVAAGTGEFEAGIFLKNGQTR*HALLAFTLGVKQLI 552
VLIVAAGTGEFEAGI KNGQTR HALLAFTLGVKQLI
Sbjct: 40 VLIVAAGTGEFEAGIS-KNGQTREHALLAFTLGVKQLI 76
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.39
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 115 KTHINIVVIGHVDSGKST 168
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 360 VTIIDAPGHRDFIKNMITGTSQAD 431
VT +D PGH FI G D
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITD 218
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.90
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 124 INIVVIGHVDSGKST 168
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 345 TSKYYVTIIDAPGHRDFIKNMITGTSQAD 431
T KYY D P + FIKN+ ++ +D
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSD 322
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 345 TSKYYVTIIDAPGHRDFIKNMITGTSQAD 431
T KYY D P + FIKN+ ++ +D
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSD 322
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 494 FFRKIPASNSPVPAATMSTGAISLRGSCDH 405
FF++IPA + V A I+ +C++
Sbjct: 97 FFQRIPAYRAEVQKAISECKGIAKGDNCEY 126
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 205 DKRTIEKFEKEAQEMG 252
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 205 DKRTIEKFEKEAQEMG 252
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 205 DKRTIEKFEKEAQEMG 252
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,411
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -