Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1218
         (316 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.           27   0.22 
AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.           27   0.22 
AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.           27   0.22 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    27   0.22 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   0.38 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   2.7  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   3.6  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    22   4.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   6.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   6.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    21   8.2  

>AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 171 QRPHRAAVPGPLPEEMRAERHGPA 100
           QR H + V GP  ++ + ++HGP+
Sbjct: 11  QRQHPSLVAGPQQQQQQHQQHGPS 34


>AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 171 QRPHRAAVPGPLPEEMRAERHGPA 100
           QR H + V GP  ++ + ++HGP+
Sbjct: 11  QRQHPSLVAGPQQQQQQHQQHGPS 34


>AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 171 QRPHRAAVPGPLPEEMRAERHGPA 100
           QR H + V GP  ++ + ++HGP+
Sbjct: 11  QRQHPSLVAGPQQQQQQHQQHGPS 34


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 171 QRPHRAAVPGPLPEEMRAERHGPA 100
           QR H + V GP  ++ + ++HGP+
Sbjct: 82  QRQHPSLVAGPQQQQQQHQQHGPS 105


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 32   RTRSRCAPSARWRPASC*RSRTRAGPWRSARISSGRGPG 148
            R  SR    +R R  S  RSR+R+G  + +R  S  G G
Sbjct: 1086 RAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSG 1124



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 86   RSRTRAGPWRSARISSGRGPGTAARCG 166
            RSR+R+G    +R  SG G    +R G
Sbjct: 1066 RSRSRSGSGSRSRSRSGSGSRAGSRAG 1092



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 32   RTRSRCAPSARWRPASC*RSRTRAGPWRSARISSGRGPGTAA 157
            R+RSR    +R   A   RSR+R+G   S   S  R    +A
Sbjct: 1098 RSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSA 1139


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 132 LEGDQGRPPGVGAELRVPRAGLPEEGGPRG 221
           ++GD+G P   GA  R  + G+P   G  G
Sbjct: 474 IKGDKGEPGFPGAIGRPGKVGVPGLSGEAG 503



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 138 GDQGR--PPGVGAELRVPRAGLPEEGGPRGPA 227
           G  GR  PPG+  E   P   + ++ GP GP+
Sbjct: 556 GKTGRDGPPGLTGEKGEPGLPVWKDRGPSGPS 587



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 138 GDQGRPPGVGAELRVPRAGLPEEGGPRG 221
           G QG    VG E R  R G P   GP+G
Sbjct: 761 GLQGLRGDVGPEGRPGRDGAPGLPGPKG 788



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 135 EGDQGRPPGVGAELRVPRAGLPEEGGPRGPAVH 233
           +G+ G     GA+      G P   GPRG   H
Sbjct: 29  KGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGH 61


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 187 ALDCLKKAARVAQQCMDGGVQAHCWPSCWADTRC 288
           A DC     R  Q C+  G   H   SC ++ +C
Sbjct: 400 ARDCQSPVDR-QQACIRCGADGHYAKSCTSEIKC 432


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = -3

Query: 251 ACTPPSMHCWATRAAFFRQSSARDA*FSAHTGRPSLV--PFQKRCEQSA 111
           AC P S+H       FF  ++ ++  F    G P  V  P+ +  E  A
Sbjct: 280 ACPPLSLHGQLLWREFFYCAATKNPTFDKMAGNPICVQIPWDRNAEALA 328


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 246 HTAVHALLGHAGRLLQAVQRAGRVVQRPHRAAV 148
           HTA   +L   G+  ++ +R  +   R +RAAV
Sbjct: 550 HTARRKVLRKKGKKQRSTRRKAQKAGRTNRAAV 582


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 138 GDQGRPPGVGAELRVPRAGLPEEGGPRG 221
           GD+G+   VG        GLP + GPRG
Sbjct: 326 GDRGQ---VGERGHKGEKGLPGQPGPRG 350



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 GDQGRPPGVGAELRVPRAGLPEEGGPRG 221
           G +G P   G +      G+P   GPRG
Sbjct: 456 GPEGMPGDKGDKGESGSVGMPGPQGPRG 483


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 254 CACTPPSMH 228
           CAC PP+ H
Sbjct: 677 CACLPPATH 685


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,990
Number of Sequences: 2352
Number of extensions: 4376
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)