Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1218
         (316 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   0.87 
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       20   6.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    20   6.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    20   6.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   6.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   8.1  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 246 HTAVHALLGHAGRLLQAVQR 187
           H   HA+LGH+G L +  Q+
Sbjct: 283 HANHHAILGHSGFLCERHQK 302


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 159 GVGAELRVPRAGLP 200
           G+GA L+V   GLP
Sbjct: 44  GIGAVLKVLTTGLP 57


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 236 SMHCWAT 216
           ++HCWAT
Sbjct: 256 TLHCWAT 262


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 236 SMHCWAT 216
           ++HCWAT
Sbjct: 256 TLHCWAT 262


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 1   TFEQINCFGAENAEPMRTQCALAASKLLKKPDQSRAVALCSHL 129
           TF+ + C  ++N+E    Q A     L   P+    V LCS +
Sbjct: 618 TFDYM-CQSSKNSENSIMQRASMKENLNVYPEFQENVQLCSEI 659


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 308  LVTALPQQRVSAQQL 264
            L  ALP Q VS QQL
Sbjct: 1110 LPPALPPQVVSCQQL 1124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,429
Number of Sequences: 438
Number of extensions: 1203
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)