Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1217
         (396 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   0.76 
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   1.8  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   2.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   9.4  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 0.76
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +2

Query: 254 HSLADLLQRRDWENPGVTQLNRLASHP 334
           H+L DLLQR D ENP       L  HP
Sbjct: 407 HALIDLLQRVD-ENPPEVGQKVLCRHP 432


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 211 GGARYPIRPIVSRITFTGRPFTTT 282
           GG RYP+   +  +   G P TTT
Sbjct: 385 GGGRYPLMHEIRSLVNGGTPSTTT 408


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 167 TGGDFKEIDLLGRQIERLA 111
           TG   +EIDL+G  +E LA
Sbjct: 262 TGDAAEEIDLMGHTVEELA 280


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 167 TGGDFKEIDLLGRQIERLA 111
           TG   +EIDL+G  +E LA
Sbjct: 269 TGDAAEEIDLMGHTVEELA 287


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 171 LRFDDELGQAATSRGGPVPNSP 236
           L ++DEL    ++R    PNSP
Sbjct: 166 LTYEDELSPGGSARRKTKPNSP 187


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 222 PGPPWKLRLDPAHHQTAENRR*LQGN 145
           PG P K  L   H QT +    L+GN
Sbjct: 714 PGAPGKDGLPGRHGQTVKGEPGLKGN 739


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,477
Number of Sequences: 2352
Number of extensions: 9313
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)