Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1217
         (396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93243-1|AAF21505.1|  318|Homo sapiens Ubc6p homolog protein.          29   7.4  
BC013973-1|AAH13973.1|  318|Homo sapiens ubiquitin-conjugating e...    29   7.4  
AL139804-1|CAI19635.1|  318|Homo sapiens NCUBE1 protein.               29   7.4  
AL138717-1|CAH70228.1|  318|Homo sapiens NCUBE1 protein.               29   7.4  
AK223464-1|BAD97184.1|  318|Homo sapiens ubiquitin-conjugating e...    29   7.4  
AJ245898-1|CAB83212.1|  318|Homo sapiens Non-Canonical UBiquitin...    29   7.4  
AF151834-1|AAD34071.1|  325|Homo sapiens CGI-76 protein protein.       29   7.4  

>U93243-1|AAF21505.1|  318|Homo sapiens Ubc6p homolog protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>BC013973-1|AAH13973.1|  318|Homo sapiens ubiquitin-conjugating
           enzyme E2, J1 (UBC6 homolog, yeast) protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>AL139804-1|CAI19635.1|  318|Homo sapiens NCUBE1 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>AL138717-1|CAH70228.1|  318|Homo sapiens NCUBE1 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>AK223464-1|BAD97184.1|  318|Homo sapiens ubiquitin-conjugating
           enzyme E2, J1 variant protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>AJ245898-1|CAB83212.1|  318|Homo sapiens Non-Canonical UBiquitin
           Conjugating Enzyme 1 (NCUBE1) protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 159 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 202


>AF151834-1|AAD34071.1|  325|Homo sapiens CGI-76 protein protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 185 IIKPQKTGGDFKEIDL----LGRQIERLARVNRYSQTGNEADLN 66
           ++ P K+G D  + D     L RQI   A VN   +T +E+DLN
Sbjct: 166 VLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLN 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,846,181
Number of Sequences: 237096
Number of extensions: 1399382
Number of successful extensions: 3956
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3953
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)