Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1216
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.27 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 107 KFKINLNKEYEILNLKSKSL 166
           K K+N N+ YE+  LKS SL
Sbjct: 151 KLKLNTNESYELTVLKSDSL 170


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 231 TSSADRFTFTMHSKKVFLCLHSKLLL 154
           TS     TF+ +SKKVF   +SK+++
Sbjct: 216 TSEKCNLTFSWYSKKVF---YSKIII 238


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 213 FTFTMHSKKVFLCLHSKLLLFRFNISYSL 127
           FT+ + +  +FL  HS L + RF  S  +
Sbjct: 152 FTYYVCNTTIFLIFHSVLPIKRFFTSLGI 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,560
Number of Sequences: 336
Number of extensions: 2545
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)