BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1216
(589 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 1.8
AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein... 24 3.2
U50467-1|AAA96029.1| 79|Anopheles gambiae protein ( Anopheles ... 23 5.5
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 23 5.5
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 5.5
CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative dodecenoy... 23 7.3
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 23 9.7
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.0 bits (52), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 186 VFLCLHSKLLLFRFNISYSL 127
+ L SKL+LFRFN Y+L
Sbjct: 191 IALRTESKLMLFRFNNQYNL 210
>AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 459
Score = 24.2 bits (50), Expect = 3.2
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = -1
Query: 295 DDLLFLATVFIKLSFHLTVSLNILGRQVH 209
+DL+ L+ +F+++ HL +S +++ +H
Sbjct: 102 NDLIGLSGMFVQMCLHLYLSPDVVQANIH 130
>U50467-1|AAA96029.1| 79|Anopheles gambiae protein ( Anopheles
gambiae putativeguanylate cyclase mRNA, partial cds. ).
Length = 79
Score = 23.4 bits (48), Expect = 5.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 109 IQDKSKQRIRDIEPEKQK 162
+ D+ +Q RD+E EKQK
Sbjct: 13 LTDRLQQTYRDLESEKQK 30
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 23.4 bits (48), Expect = 5.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 118 KSKQRIRDIEPEKQKLRMKT*KY 186
KS +R R +E EKQK+R K+
Sbjct: 187 KSLERFRRMELEKQKIRPTNKKF 209
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.4 bits (48), Expect = 5.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 109 IQDKSKQRIRDIEPEKQK 162
+ D+ +Q RD+E EKQK
Sbjct: 451 LTDRLQQTYRDLESEKQK 468
>CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative
dodecenoylCoA deltaisomerase protein.
Length = 324
Score = 23.0 bits (47), Expect = 7.3
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = -3
Query: 236 IKHPRQTGSPLPCTVKKYFYVFILSFCFSGSISRILCLDL 117
+ HP P ++K I +C +G + L DL
Sbjct: 124 VHHPEGVMGPTRRMIRKPLVCAITGYCVAGGLELALMCDL 163
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 22.6 bits (46), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 91 LASLMEIQDKSKQRIRDI 144
LA E+QDK++Q I D+
Sbjct: 322 LALNQELQDKARQNITDV 339
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,241
Number of Sequences: 2352
Number of extensions: 9498
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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