Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1215
(439 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 137 4e-33
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 137 4e-33
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 137 4e-33
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 137 4e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 137 4e-33
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 137 4e-33
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 137 4e-33
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 137 4e-33
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 137 4e-33
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 137 4e-33
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 136 9e-33
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 117 3e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 117 3e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 116 8e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 116 8e-27
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 90 6e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 72 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 66 1e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 1e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.022
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.022
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 4.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 6.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 7.9
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 7.9
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 116 bits (279), Expect = 8e-27
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 114 bits (275), Expect = 2e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 437 R 439
R
Sbjct: 73 R 73
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 222 MVGMGQKDSYV 254
MVGMGQKDSYV
Sbjct: 1 MVGMGQKDSYV 11
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 437 R 439
R
Sbjct: 103 R 103
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 144 KAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+AGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 41
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 137 bits (331), Expect = 4e-33
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 R 439
R
Sbjct: 117 R 117
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 136 bits (328), Expect = 9e-33
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 437 R 439
R
Sbjct: 116 R 116
Score = 111 bits (266), Expect = 3e-25
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+EE+AALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 117 bits (282), Expect = 3e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 116 bits (279), Expect = 8e-27
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 116 bits (279), Expect = 8e-27
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRA FPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDM 337
DEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 90.2 bits (214), Expect = 6e-19
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKVN 436
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 437 R 439
R
Sbjct: 120 R 120
Score = 53.6 bits (123), Expect = 6e-08
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFI 57
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 71.7 bits (168), Expect = 2e-13
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 394
R G + L+ +E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 395 PVLLTEAPLNPKVNR 439
+LLTE PLNP NR
Sbjct: 106 KLLLTEPPLNPNSNR 120
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRP 206
+VVDNG+G K G+AG + P FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/62 (51%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKV 433
DEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 69 DEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPE 128
Query: 434 NR 439
NR
Sbjct: 129 NR 130
Score = 34.3 bits (75), Expect = 0.039
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIV 197
M ++ A V+DNG+G K G+AG+ P+ PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 302 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVNR 439
++ G++ +W+ EKI H++ N L P EHPVL +E+ N + R
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR 139
Score = 35.5 bits (78), Expect = 0.017
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIV 197
+EV+ LV D GS + GFAG++ P+ + PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.022
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
++E K + ++ PIE G V NWD ++IW TF
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.022
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
++E K + ++ PIE G V NWD ++IW TF
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 351 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSLHKSPSVPYRPSRPDG 208
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEGLLCRDEAQSKRG 280
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical
protein ZK666.8 protein.
Length = 366
Score = 27.5 bits (58), Expect = 4.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -3
Query: 362 RRYDAKSSPCHPS**RFRVRW---GI*GSGYLFCSVPHLYIRVLLSHTDHHALMAGPSHD 192
+R D S+P P +FR RW GI G G +Y+ + + + A+ A P
Sbjct: 48 KRPDPTSTPLMPIDEKFRKRWHIEGIIGKG----GYGEIYLAIDMKLAEEVAIKAEPLVR 103
Query: 191 RGELGARSII 162
+G++ R I+
Sbjct: 104 KGKIARRMIL 113
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAEFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 397
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 360 STMSCVSPPRNTQSCSLRLP 419
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 360 STMSCVSPPRNTQSCSLRLP 419
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 323 NWDDMEKIWHHTFYNE--LRVAPEEHPV 400
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,007,654
Number of Sequences: 27780
Number of extensions: 251382
Number of successful extensions: 1009
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -