Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1215
(439 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 135 1e-32
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 135 1e-32
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 135 1e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 135 1e-32
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 134 2e-32
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 134 2e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 134 2e-32
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 134 2e-32
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 134 2e-32
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 129 9e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 118 2e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 113 7e-26
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 77 5e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 64 4e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 2e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 6e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 6e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.064
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 31 0.34
At3g12650.1 68416.m01575 expressed protein 30 0.79
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.0
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 1.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 28 3.2
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.2
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 28 3.2
At3g48860.2 68416.m05337 expressed protein 27 4.2
At3g48860.1 68416.m05336 expressed protein 27 4.2
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 27 5.5
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 27 5.5
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 7.3
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 7.3
At4g32105.1 68417.m04568 expressed protein 26 9.7
At1g76010.1 68414.m08825 expressed protein 26 9.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 1e-32
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 1e-32
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (326), Expect = 1e-32
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (326), Expect = 1e-32
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 134 bits (325), Expect = 2e-32
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 134 bits (325), Expect = 2e-32
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 89.8 bits (213), Expect = 7e-19
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRA FPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 134 bits (325), Expect = 2e-32
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 89.8 bits (213), Expect = 7e-19
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRA FPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 134 bits (325), Expect = 2e-32
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRA FPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 134 bits (325), Expect = 2e-32
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK N
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 R 439
R
Sbjct: 118 R 118
Score = 89.8 bits (213), Expect = 7e-19
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRA FPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 129 bits (311), Expect = 9e-31
Identities = 53/61 (86%), Positives = 60/61 (98%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVN 436
DEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPKVN
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 437 R 439
R
Sbjct: 119 R 119
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV 254
+E A+V DNG+GM KAGFAGDDAPRA FPS+VGRPRH+GVMVGM +KD++V
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFV 57
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 118 bits (284), Expect = 2e-27
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
L D+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 425 PKVNR 439
PK +R
Sbjct: 69 PKADR 73
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 113 bits (271), Expect = 7e-26
Identities = 52/74 (70%), Positives = 57/74 (77%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 397
RDG E + +E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 398 VLLTEAPLNPKVNR 439
VLLTEAP NPK NR
Sbjct: 94 VLLTEAPYNPKANR 107
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQGVMVGMGQKDSYV-EMRHRAKEV 281
+V D G GM +AGFAGD+AP+ FP +VGRPR G+ +SYV E H +++
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDI 55
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 77.0 bits (181), Expect = 5e-15
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +2
Query: 284 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVNR 439
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NR
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNR 117
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRP--RHQGVMVGMGQKDSYV-----EMRHR 269
+V DNG+G K GFAG++ P + FP +VGRP R++ ++ KD V E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 64.1 bits (149), Expect = 4e-11
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 257 DEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 427
DEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P
Sbjct: 72 DEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Query: 428 KVNR 439
+R
Sbjct: 132 PESR 135
Score = 33.5 bits (73), Expect = 0.064
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFAGDDAPRAEFPSIV 197
A+V+DNG+G K GFAG+ P P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.4 bits (135), Expect = 2e-09
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVNR 439
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + R
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQR 134
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+A FPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 6e-09
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKVNR 439
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + R
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQR 140
Score = 54.4 bits (125), Expect = 3e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+A FPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKVNR 439
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ P V R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRP 206
+V+DNG G+ KAG G+ P P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 40.3 bits (90), Expect = 6e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAEFPSIVGRPRHQ 215
+V+DNG+ + G+AG+ PR F +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKVNR 439
P + +V ++ ME I + F + +HP+L+TE NP +R
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSR 132
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.064
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 235 PIPTITP*WRGLPTIEGNSARGASSPAKPALHIPEPLSTTNAATSS 98
P P I P RGL +G A +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQG--ATSSSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKVNR 439
PIE G++ +WD ME + + Y L E +L T+ PK R
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIR 104
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 29.9 bits (64), Expect = 0.79
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 424 VEGSLSEQDWVFLGGDTQLIVEGMMPNL 341
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 385
LL D A L++KY + H I + W + +IW L+ P
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 385
LL D A L++KY + H I + W + +IW L+ P
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 188 LDRGKAPPSGRDGR--YGTEGLLCRDEAQSKRGILTLK 295
L+RG+ S R GR +G G RD+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -1
Query: 211 WRGLPTIEGNSARGASSPAKPALHIPEPLSTTNAATSSSHI 89
WR P + ++A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 345 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 256
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAEFPSIVGR 203
E A VV +G+G+ G+D R E P +V R
Sbjct: 146 EAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTR 179
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 190 EGNSARGASSPAKPALHIPEPLSTTNAATSSSH 92
E S R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 190 EGNSARGASSPAKPALHIPEPLSTTNAATSSSH 92
E S R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 EGLLCRDEAQSKRGILTLKYPIE-HGIVTNWDDMEKIWHHTFY 364
+GLL RD+ S + LK+ + T +D +WH FY
Sbjct: 14 QGLLQRDKHNSCSPFVELKFDNQIFRATTKHNDPNPVWHECFY 56
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 354 IPSTMSCVSPPRNTQSCSLRLPSTPR 431
IP+T+ PP QS SL LPS P+
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPPQ 212
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 288 VRIPLLLCASSLHKSPSVPYRPSRPDGGA 202
V +PL C PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 396 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSLHKSPSVPY 229
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
>At4g32105.1 68417.m04568 expressed protein
Length = 124
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 182 LGARSIISCETGL-AHTGAIVYYQRGNFFVAHLELVFN 72
+G +S+ T L + +G I GNF H++ VFN
Sbjct: 68 VGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFN 105
>At1g76010.1 68414.m08825 expressed protein
Length = 350
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 191 DRG--KAPPSGRDGRYGTEGLLCRDEAQSKRG 280
DRG APP GR G G +G D Q +RG
Sbjct: 236 DRGGYDAPPQGRGGYDGPQGRGGYDGPQGRRG 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,500,646
Number of Sequences: 28952
Number of extensions: 240650
Number of successful extensions: 708
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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