Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1214
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 256 LFLLCLFYWQGYPIIWWCI 200
           LFLLC++Y+    II  CI
Sbjct: 280 LFLLCIYYFYCALIILLCI 298



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 280 FMYCEGN*LFLLCLFYWQGYPIIWWCI 200
           F++   + LFLLCL Y+  + +   CI
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLLFLPCI 212


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 218 YHMVVYMILLVTVLVELGKEFDAQ 147
           +H++++ +LL    +E    FD Q
Sbjct: 48  FHLILFAVLLYFASLEKNPLFDGQ 71


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 141 VRLCVELFAEFDEYGYEQDHIH 206
           V LC +L  +F E  +EQ  ++
Sbjct: 306 VFLCYKLMEKFPERSHEQQELY 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,641
Number of Sequences: 336
Number of extensions: 2034
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)