Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1214
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z81041-1|CAB02786.2|  362|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 227 RLSYHMVVYMILLVTVLVELGKEFDAQPNLNISP 126
           R   HM +Y+I  VT   EL KE++ +  + I P
Sbjct: 223 RFGAHMNLYLISSVTSFYELMKEYEKEGYVTIQP 256


>Z81041-1|CAB02786.2|  362|Caenorhabditis elegans Hypothetical
           protein C27A7.2 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 254 VFVMFILLA-RLSYHMVVYMILLVTVLVELGKEFDAQ 147
           +F+M +  A R   HM +Y+I +V    +L KE++ Q
Sbjct: 122 IFLMHVHTAHRFGAHMHIYVISIVNAYYDLMKEYERQ 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,201,128
Number of Sequences: 27780
Number of extensions: 176572
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)