Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1213
         (520 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40380-1|AAB05895.1|  374|Homo sapiens presenilin I-374 protein.       30   5.6  
U40379-1|AAB05894.1|  463|Homo sapiens presenilin I-463 protein.       30   5.6  
L76528-1|AAB46371.1|  467|Homo sapiens presenilin 1 protein.           30   5.6  
L76517-1|AAB46370.1|  463|Homo sapiens presenilin 1 protein.           30   5.6  
L42110-1|AAB46416.1|  467|Homo sapiens S182 protein.                   30   5.6  
BC011729-1|AAH11729.1|  463|Homo sapiens PSEN1 protein protein.        30   5.6  
AK223173-1|BAD96893.1|  463|Homo sapiens presenilin 1 isoform I-...    30   5.6  
AF416717-1|AAL16811.1|  378|Homo sapiens presenilin 1 protein.         30   5.6  
AF109907-2|AAC97960.1|  467|Homo sapiens PS1 protein.                  30   5.6  
AC004858-1|AAF19253.1|  289|Homo sapiens presenilin 1 protein.         30   5.6  

>U40380-1|AAB05895.1|  374|Homo sapiens presenilin I-374 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTY 185


>U40379-1|AAB05894.1|  463|Homo sapiens presenilin I-463 protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTY 185


>L76528-1|AAB46371.1|  467|Homo sapiens presenilin 1 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTY 189


>L76517-1|AAB46370.1|  463|Homo sapiens presenilin 1 protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTY 185


>L42110-1|AAB46416.1|  467|Homo sapiens S182 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTY 189


>BC011729-1|AAH11729.1|  463|Homo sapiens PSEN1 protein protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTY 185


>AK223173-1|BAD96893.1|  463|Homo sapiens presenilin 1 isoform I-463
           variant protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 161 WLIISSLLLLFFFSFIYLGEVFKTY 185


>AF416717-1|AAL16811.1|  378|Homo sapiens presenilin 1 protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTY 189


>AF109907-2|AAC97960.1|  467|Homo sapiens PS1 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTY 189


>AC004858-1|AAF19253.1|  289|Homo sapiens presenilin 1 protein.
          Length = 289

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 281 FIVIAVLLLMFFFCLIYLREIVLIY 207
           +++I+ LLL+FFF  IYL E+   Y
Sbjct: 165 WLIISSLLLLFFFSFIYLGEVFKTY 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,533,266
Number of Sequences: 237096
Number of extensions: 649957
Number of successful extensions: 1201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)