Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1212
(517 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 50 1e-06
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 47 1e-05
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 43 1e-04
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42) 42 3e-04
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 41 5e-04
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 41 7e-04
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 40 0.001
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 40 0.001
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 40 0.001
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 40 0.001
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.005
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.005
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 38 0.006
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.009
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.009
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 37 0.011
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 37 0.011
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.011
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 36 0.015
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 36 0.026
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 35 0.035
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 35 0.046
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 34 0.080
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 33 0.14
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 32 0.32
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 31 0.74
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 30 1.3
SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38) 29 1.7
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 2.2
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 29 3.0
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 28 5.3
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I++H++VLS CS YF MF N ++ ++++K + +AL+ L+ F Y G+ + QE +
Sbjct: 43 ISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDETALQLLVDFAYTGKAEITQENV 102
Query: 420 ASFISTA 440
+ A
Sbjct: 103 QLLLPAA 109
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I +H++VL+ CSPYF+ MF +M ++ + ++DV SA+ L+ F Y + +++ +
Sbjct: 70 IHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNV 129
Query: 420 ASFISTA 440
+ + A
Sbjct: 130 QTLLPAA 136
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 240 QVIASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 413
Q A H+ VL+ CS YF MF ++ ++ I+ +KD+ ++ L++F Y G V + E
Sbjct: 21 QSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVE 80
Query: 414 ELASFISTA 440
+ + ++TA
Sbjct: 81 NVQNLLATA 89
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 GCRRQVIASHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
G +R+ I +HK VLS+ S F MF TQ V L DV SA LL+F+Y EV +
Sbjct: 1618 GPQRRRIPAHKFVLSIGSAVFDAMFNGGIATQSDEVELPDVEPSAFMALLRFLYTDEVQI 1677
Query: 405 KQEELASFISTA 440
E + + + TA
Sbjct: 1678 GPETVMTTLYTA 1689
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN---PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 416
I SHKLVL+ SPYF+ MF N TQ I L D+ AL+ ++++ Y G++ + ++
Sbjct: 44 IPSHKLVLAASSPYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDN 102
Query: 417 L 419
+
Sbjct: 103 V 103
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 240 QVIASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 413
Q I +HKLVLS S YF+ MF M +Q + ++ + ++ L++F Y V + E
Sbjct: 36 QEIDAHKLVLSASSEYFRAMFLTDMKESQQKFITIRAIDSQSMTTLVEFAYTSNVRINSE 95
Query: 414 ELASFISTA 440
+ + + A
Sbjct: 96 NVETLLYAA 104
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I +HKLVL+ S YF MF M T V L D+ +A++ L+ + Y E+ ++ + +
Sbjct: 45 IRAHKLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPAAVQALISYSYTSEIEIRVDNV 104
Query: 420 ASFISTA 440
+ +S A
Sbjct: 105 ENLLSVA 111
>SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42)
Length = 635
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 249 ASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 422
++H+LVL+ SP+F +F +M Q + LK V S + ++L+++Y G+ ++ E
Sbjct: 46 SAHRLVLAAGSPFFHGLFTTEMKEKQENKIVLKQVKASVMENVLEYLYTGKTSLNPENAE 105
Query: 423 SFISTA 440
+ +A
Sbjct: 106 DLVVSA 111
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 237 RQVIASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 410
RQ++A H+LVL+ S YFQ MF + + V L+DV A+ L+ F Y G++++
Sbjct: 56 RQIVA-HRLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVELLVDFAYTGKLDITT 114
Query: 411 EELASFI 431
E + S +
Sbjct: 115 ENVQSIM 121
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I SH+L+L+ S YF MF M+ T + LK+V + +R L+++ Y + + + +
Sbjct: 47 IPSHRLILAANSSYFYSMFTSGMSETAQNRINLKEVDATVVRQLIEYCYTSTIEINENNV 106
Query: 420 ASFIS 434
+ +S
Sbjct: 107 QNLLS 111
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 255 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 428
HK+V+S SPYF+ +F + + V ++ + LL F+Y G +NV +E +
Sbjct: 48 HKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQL 107
Query: 429 ISTA 440
+ A
Sbjct: 108 LPAA 111
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 222 NVGCRRQVIASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGE 395
N+ QV A+H+ VL+ S +F MF M + + L ++ AL +L F Y E
Sbjct: 55 NLEVEGQVFAAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFYTRE 114
Query: 396 VNVKQEELASFISTA 440
+N+ ++ + + A
Sbjct: 115 INISRDNVVDILEAA 129
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 398
VG RR I +H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F Y +
Sbjct: 48 VGDRR--IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARI 105
Query: 399 NVKQEELASFISTA 440
V ++ + + + A
Sbjct: 106 QVSEDNVQALLPAA 119
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 398
VG RR I +H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F Y +
Sbjct: 48 VGDRR--IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARI 105
Query: 399 NVKQEELASFISTA 440
V ++ + + + A
Sbjct: 106 QVSEDNVQALLPAA 119
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I H++VL+ CS YF MF M + ++ ++ +S ++ L+ FMY ++ + + +
Sbjct: 45 IRCHRVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVIQLINFMYTRKITITIDNI 104
Query: 420 ASFISTA 440
S ++ +
Sbjct: 105 ESLLTAS 111
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
+HK +L+ S YF MF + T V +++++ +A+ LL F+YQG++ + +E +
Sbjct: 47 AHKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIYQGKLLITEENV 103
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 425
+H++VL+ S YF +F +M P V L+++ S + +L ++Y GE+ V +
Sbjct: 43 AHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYLYTGEITVTELNAED 102
Query: 426 FISTA 440
I++A
Sbjct: 103 LIASA 107
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFKMNPTQH-PIVFLKDVSHSALRDLLQFMYQGEV 398
+HK VLSV SP F+ MF N + P V L D + ++LL+++Y +V
Sbjct: 45 AHKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQV 94
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 249 ASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 422
A+HK VL S +F +F M Q V LK + + DLL ++Y G++ V +
Sbjct: 33 AAHKNVLCASSIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQ 92
Query: 423 SFISTA 440
F++ A
Sbjct: 93 DFLAAA 98
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 416
+H+ +L+ SPYF+ +F +M Q + L +V + D+L ++Y G V V++ +
Sbjct: 39 AHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEESK 95
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 243 VIASHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 413
V+++H++VL+ SPYF+E+ + V + A+ +L+F Y G + + +
Sbjct: 51 VLSAHRVVLAALSPYFRELLLPTNNEKAEKEYVMPDSLKPGAVVAMLEFFYSGTLQINLK 110
Query: 414 ELASFISTAGT 446
+ ++ A T
Sbjct: 111 SIEDLLAAAST 121
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 410
+H+ +L+ SPYF+ +F +M Q + L +V + D+L ++Y G V V++
Sbjct: 1408 AHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEE 1462
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 398
+H+ +LS S YF MF M + +V + V+ ++R +L F+Y GE+
Sbjct: 47 AHRNILSASSDYFFAMFNGNMKESSQDVVTITGVTPDSMRSILNFIYTGEI 97
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 249 ASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 422
++HK +L+ S YF MF M + V LK + S ++++L F+Y G + + + +
Sbjct: 53 SAHKGILAANSHYFMAMFTTDMIEKEQERVILKKLKPSVVKEILDFLYTGRIEIDNKNVR 112
Query: 423 SFISTA 440
+ +
Sbjct: 113 DLLEAS 118
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 35.5 bits (78), Expect = 0.026
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
I +H++VL+ CSPYF+ M T + L + ++ ++++ Y + + +E +
Sbjct: 50 IKAHRVVLAACSPYFRAMLTTGFAETFMSTIPLHECDPVGVQSIVEYFYSKRLTITKENI 109
Query: 420 ASFISTA 440
+S A
Sbjct: 110 EGLLSAA 116
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 35.1 bits (77), Expect = 0.035
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
+ SH++VL+ SPYF M M ++ V + + +AL +L+ F Y G + E +
Sbjct: 43 LVSHRVVLAGWSPYFHAMLTGDMLESRLEKVTIHGIECAALEELINFCYTGRTEIHVENV 102
Query: 420 ASFI 431
S +
Sbjct: 103 QSLM 106
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 398
I +HK VL+ SP F+ MF K+ T I L D + + ++L+++Y+ EV
Sbjct: 10 IPAHKYVLATSSPVFEAMFFGKLAETSRNIT-LPDCFYEGVLEMLRYLYRDEV 61
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 398
I +HK VL+ SP F+ MF K+ T I L D S + ++L+F+Y E+
Sbjct: 41 IPAHKYVLATSSPVFEAMFFGKLAETGFTIA-LPDCSAEGMLEMLRFIYTEEI 92
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 33.9 bits (74), Expect = 0.080
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
+H++VL+ CS YF MF M +Q ++ L+ ++ + LL F+Y V +
Sbjct: 51 AHRIVLASCSDYFYAMFTNDMLESQKGVIELQGLASDTMEVLLDFVYTETVKL 103
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 422
I HKL+L++ SP F MF + Q + + D + +LL++ Y E + +E +
Sbjct: 2776 IPGHKLILAISSPVFYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATINEENVL 2835
Query: 423 SFISTA 440
+ A
Sbjct: 2836 GVLYLA 2841
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALRDLLQFMYQGEVNV 404
I +H+ VLSV SP F+ MF + + L D AL ++L++ Y EV +
Sbjct: 43 IPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSEMLRYAYYDEVKL 96
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 243 VIASHKLVLSVCSPYFQEMFKMNPTQHPIVFLK-DVSHSALRDLLQFMYQGEVNVKQEEL 419
+ +HK+VL+ S YF+ +F + + D+S L+ +L+++Y G+V++
Sbjct: 40 IFPAHKIVLAAKSDYFKALFTTEMAEKNCQEISLDISTRTLKAILKYVYCGDVSLNVSNA 99
Query: 420 ASFISTA 440
S A
Sbjct: 100 RSVFVAA 106
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 392
+HK +L+ SP F MF +M ++ V + D+ +++L+F+Y G
Sbjct: 236 AHKAILAARSPVFSAMFEHEMEESRKGRVEILDIDPDVFQEMLKFVYTG 284
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 240 QVIASHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 410
Q HKLVL+ S YF+ MF + +++ +V L D+ + ++ + Y ++ +
Sbjct: 42 QSFPGHKLVLAANSTYFRAMFGEGFVESSKNDVV-LHDLDPKGVNAVISYFYNSKIEINA 100
Query: 411 EELASFISTA 440
+ + + A
Sbjct: 101 DNFGAVFAVA 110
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +3
Query: 240 QVIASHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 407
Q HKLVL+ S YF+ MF + + V L D+ + ++ + Y ++ +
Sbjct: 84 QSFPGHKLVLAANSTYFRAMFGLREGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEIN 143
Query: 408 QEELASFISTA 440
+ + + A
Sbjct: 144 ADNFEAVFAVA 154
>SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38)
Length = 388
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 234 RRQVIASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 344
++Q+ S K+++ +CSP + +M +M P + P FL +
Sbjct: 289 QQQISTSSKIIV-LCSPKYLKMCQMRPKEDPKAFLTE 324
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 25.0 bits (52), Expect(2) = 2.2
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF----KMN--PTQHPIVFLKDVSHS 356
+H+ +LS SP F+E+F K+N P ++ +F D+S S
Sbjct: 265 AHQTILSAASPIFRELFLGSKKVNAVPRKYQAIF-SDISWS 304
Score = 22.6 bits (46), Expect(2) = 2.2
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 342 DVSHSALRDLLQFMYQGEVNVKQEELASFISTAGTTSS 455
D+S + +LQF+Y G + E + F+ T++
Sbjct: 329 DISCESFEKILQFLYTGLPGFSEIEDSDFVLDVKKTAA 366
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 413
I +HK +L V SP F MF T V L D L + L+++Y V E
Sbjct: 47 IPAHKYILGVSSPVFFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRVKFTME 103
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 63 PTGIISTKLRIGSTSSRRYHGVGRTIFTMLEQFPRKYVSRLSWPAVAWRSR 215
P ++ST++ G + R YH + + E F ++ ++R S V R
Sbjct: 108 PQSLVSTQILSGKLNERSYHQTMHQLLFVEEVFMKQQIARFSMERVTLLGR 158
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 255 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 434
HK LS+ SP F++MF+ Q + L ++++L +Y V +E ++
Sbjct: 31 HKSTLSMWSPVFEKMFRERNDQE--ICLPGKKSKEIKEMLLVIYPTSKKVTEENCYYLLT 88
Query: 435 TA 440
A
Sbjct: 89 LA 90
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 121 MASDEQFSLCWNNFHANMSAGFHGL 195
M S E WN F N++AG+H L
Sbjct: 203 MMSYEGMQFDWNTFSVNLTAGYHQL 227
>SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 237 RQVIASHKLVLSVCSPYFQEMF 302
+Q I +HK ++S+ SP F MF
Sbjct: 66 KQSIPAHKYIMSISSPVFSSMF 87
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH---SALRDLLQFMYQGEVN 401
I HK+VL+ SPYF+ +F + + + ++ S+ A+ +++ ++Y G+++
Sbjct: 59 IPCHKVVLAARSPYFRHLFINSESGQYVKNVELPSYFSILAVDEVINYLYSGKLH 113
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,451,063
Number of Sequences: 59808
Number of extensions: 298754
Number of successful extensions: 695
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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