Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1212
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    43   1e-04
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    40   8e-04
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    38   0.004
Z30662-10|CAI58651.1|  409|Caenorhabditis elegans Hypothetical p...    37   0.010
Z30662-9|CAA83138.2|  451|Caenorhabditis elegans Hypothetical pr...    37   0.010
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    34   0.069
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    34   0.069
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    33   0.092
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       33   0.092
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.21 
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.21 
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    32   0.21 
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    32   0.28 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    31   0.37 
U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = +3

Query: 237 RQVIASHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVN 401
           RQ I +HK VLS+ S  F  MF   + P  T+  + + L DV  SA   LL+F+Y  EV 
Sbjct: 201 RQRIPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVK 260

Query: 402 VKQEELASFISTA 440
           ++ E + + + TA
Sbjct: 261 IEAESVMTTLYTA 273


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +3

Query: 231 CRRQVIASHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
           C  + I +H++VLS CSPYF  MF  +M       + ++++    L  L++F Y G + +
Sbjct: 62  CGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAI 121

Query: 405 KQEELASFISTA 440
               +   +  A
Sbjct: 122 DDSNVQDILPAA 133


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +3

Query: 246 IASHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNVKQEEL 419
           +++HK++L+   PYF+ MF ++  +  +  + ++D+++  +  LL F Y GE+ +    +
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNV 121

Query: 420 ASFI 431
            S +
Sbjct: 122 QSIM 125


>Z30662-10|CAI58651.1|  409|Caenorhabditis elegans Hypothetical
           protein T16H12.5b protein.
          Length = 409

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +3

Query: 216 RRNVGCRRQVIASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 389
           + ++G   Q    HK +L+  S  F  MF+  M  +   +  + D+    +R+LL +MY 
Sbjct: 230 KSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYT 289

Query: 390 GEVNVKQEELASFISTA 440
           G+    ++   S I+ A
Sbjct: 290 GQTKYIEQMAQSLIAAA 306


>Z30662-9|CAA83138.2|  451|Caenorhabditis elegans Hypothetical
           protein T16H12.5a protein.
          Length = 451

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +3

Query: 216 RRNVGCRRQVIASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 389
           + ++G   Q    HK +L+  S  F  MF+  M  +   +  + D+    +R+LL +MY 
Sbjct: 272 KSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYT 331

Query: 390 GEVNVKQEELASFISTA 440
           G+    ++   S I+ A
Sbjct: 332 GQTKYIEQMAQSLIAAA 348


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +3

Query: 246 IASHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVSHSALRDLLQFMYQGEVNVKQE 413
           +++HK++L+   PYF+ MF ++  +  +  +     D+++  +  LL F Y GE+ +   
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTS 121

Query: 414 ELASFI 431
            + S +
Sbjct: 122 NVQSIM 127


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +3

Query: 246 IASHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG 392
           I +H+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 33.5 bits (73), Expect = 0.092
 Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 240 QVIASHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 410
           ++I +HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N   
Sbjct: 210 KIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDI 269

Query: 411 EELASFISTA 440
            ++A+ +  A
Sbjct: 270 TDMATALLIA 279


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 33.5 bits (73), Expect = 0.092
 Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 240 QVIASHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 410
           ++I +HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N   
Sbjct: 210 KIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDI 269

Query: 411 EELASFISTA 440
            ++A+ +  A
Sbjct: 270 TDMATALLIA 279


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +3

Query: 249 ASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 428
           A+H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 429 ISTA 440
           +  A
Sbjct: 114 LRFA 117


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +3

Query: 249 ASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 428
           A+H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 429 ISTA 440
           +  A
Sbjct: 114 LRFA 117


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +3

Query: 249 ASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 428
           A+H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 429 ISTA 440
           +  A
Sbjct: 114 LRFA 117


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 14/62 (22%), Positives = 29/62 (46%)
 Frame = +3

Query: 255 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 434
           H +V+   S  F E F      +    + D    ++R +  +MY GE+++ +  +A  ++
Sbjct: 49  HSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLA 108

Query: 435 TA 440
            A
Sbjct: 109 VA 110


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 258 KLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFMYQGEVNVKQEELASFI 431
           K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +Y   + +    ++  +
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234


>U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical
           protein ZC239.6 protein.
          Length = 258

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +3

Query: 216 RRNVGCRRQVIASHKLVLSVCSPYFQ---EMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 386
           R NVG +  V +  K  L+    YF+   E+ ++NPT  PI   +   H     +L FM 
Sbjct: 3   RLNVGGKEFVTS--KATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMR 57

Query: 387 QGEVNVKQEELASFISTA 440
            G+V++ QE L   +  A
Sbjct: 58  DGDVDLPQEYLNQLLREA 75


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 215  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 120
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,637,333
Number of Sequences: 27780
Number of extensions: 229661
Number of successful extensions: 444
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)