Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1212
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      83   1e-18
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          70   1e-14
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   5e-05
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.5  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   3.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   10.0 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   10.0 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   10.0 

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 83.4 bits (197), Expect = 1e-18
 Identities = 34/72 (47%), Positives = 52/72 (72%)
 Frame = +3

Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
           + C  + + +H++VLS CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV
Sbjct: 36  LACDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNV 95

Query: 405 KQEELASFISTA 440
            Q  L+SF+ TA
Sbjct: 96  HQRSLSSFLKTA 107



 Score = 45.6 bits (103), Expect = 3e-07
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 121 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAIN*FYQYVLPIFKKC 300
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+A         P F++ 
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 301 SK 306
            K
Sbjct: 61  LK 62


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 70.1 bits (164), Expect = 1e-14
 Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +3

Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALRDLLQFMYQGEVN 401
           + C    + +HK+VLS CS YFQ++   NP +HP I+  +DV  + L+ +++F+Y+GE++
Sbjct: 40  LACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEID 99

Query: 402 VKQEELASFISTA 440
           V Q EL S + TA
Sbjct: 100 VSQAELQSLLKTA 112



 Score = 39.5 bits (88), Expect = 2e-05
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +1

Query: 133 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQA 255
           + + L WNN+ +NM++ FH LL     VDVTLA     L+A
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKA 49


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 5e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 121 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 237
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 502 WMEWNFLHFDXRLNL*LEVVPAVLINDANS 413
           W+E +F +FD  +N    VV  V  N+ N+
Sbjct: 42  WVEESFTNFDKGINWRSYVVCDVAYNNVNN 71


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 97  VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 228
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 369 LLQFMYQGEVNVKQEELASFI 431
           ++  +Y G VNV+ E + S++
Sbjct: 43  IIDEVYNGNVNVEDENVQSYV 63


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 98  FHVESSLSWRRTNNFHY 148
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 140 NCSSDAMIATTRRGTYPKLCTYNS 69
           NC  D +    +RGT  + C + +
Sbjct: 479 NCDIDCINRVVQRGTKMQFCIFRT 502


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 373 NKSLSAE*LTSFKNTIGCC 317
           NKS     L  FK+T  CC
Sbjct: 41  NKSSGPNELGRFKHTDACC 59


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 373 NKSLSAE*LTSFKNTIGCC 317
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 119 SWRRTNNFHY 148
           SWR T+NF Y
Sbjct: 209 SWRITHNFFY 218


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 373 NKSLSAE*LTSFKNTIGCC 317
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,037
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)