Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1212
(517 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 45 3e-05
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 45 3e-05
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 36 0.012
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 36 0.012
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 33 0.086
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 33 0.15
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 31 0.46
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 29 1.9
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 1.9
At1g28530.1 68414.m03508 expressed protein 29 1.9
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 29 2.5
At1g28530.2 68414.m03507 expressed protein 28 3.2
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 27 5.7
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 27 7.5
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 27 9.9
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 407
SHK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
VG + +HK++L F + + ++ L+ VS+ L LLQ++Y G +
Sbjct: 217 VGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQI 271
Query: 405 KQEELA 422
+ ELA
Sbjct: 272 LESELA 277
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 407
SHK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 225 VGCRRQVIASHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 404
VG + +HK++L F + + ++ L+ VS+ L LLQ++Y G +
Sbjct: 217 VGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQI 271
Query: 405 KQEELA 422
+ ELA
Sbjct: 272 LESELA 277
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 416
I +HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 417 LASFISTA 440
S A
Sbjct: 97 YRSLYLAA 104
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 416
I +HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 417 LASFISTA 440
S A
Sbjct: 97 YRSLYLAA 104
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 33.5 bits (73), Expect = 0.086
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQ 389
+HKLVL+ SP+F+ + F + V + D+ + LLQFMY+
Sbjct: 211 AHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYK 257
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 413
I +HK VL SP F+ M + M + + + DVS+ ALR + ++Y E + ++
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQ 137
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 425
+HKLVL+ S +F+ MF + + V + D+ + LL FMY+ + E L +
Sbjct: 218 AHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVEPLTA 276
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN----PTQH-PIVFLKDVSHSALRDLLQFMYQG----EV 398
I++HKL+L+ S F+ MF+++ T+H + L ++ H L ++F+
Sbjct: 39 ISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEFICSDGSMLSA 98
Query: 399 NVKQEELASFIS 434
NVKQ + +++
Sbjct: 99 NVKQHARSLYLA 110
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 386
I++HK +LS S F+EMF+ + ++ + L ++ H L + F Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
>At1g28530.1 68414.m03508 expressed protein
Length = 614
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 60 SPTGIISTKLRIGSTSSRRYHGVGRTIFTMLEQFPRK-----YVSRLSWPAVAWRSRRRN 224
+P +ST + S+ R + I Q K Y+ + +P + W S+RR
Sbjct: 193 NPREQVSTSFTLSSSDERVISVIAEVICISALQSTEKHFLDDYLGKAKFPFMKWLSKRRR 252
Query: 225 VGCRRQVIASHKL 263
+ R + HKL
Sbjct: 253 IASRDCSVVLHKL 265
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 428
+H+LVL+ SP F+ E + + + + D+ + LL ++Y+ + E +S
Sbjct: 229 AHRLVLAARSPVFESEFLDVTGEEDRDIEVTDMEPKVFKALLHYIYKDALIEDAESSSSS 288
Query: 429 ISTAGTTSS 455
S+ G ++S
Sbjct: 289 GSSVGPSAS 297
>At1g28530.2 68414.m03507 expressed protein
Length = 506
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +3
Query: 75 ISTKLRIGSTSSRRYHGVGRTIFTMLEQFPRK-----YVSRLSWPAVAWRSRRRNVGCRR 239
+ST + S+ R + I Q K Y+ + +P + W S+RR + R
Sbjct: 90 VSTSFTLSSSDERVISVIAEVICISALQSTEKHFLDDYLGKAKFPFMKWLSKRRRIASRD 149
Query: 240 QVIASHKL 263
+ HKL
Sbjct: 150 CSVVLHKL 157
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 249 ASHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 386
++HKLVLS S F++M + + Q + L ++ H L ++F+Y
Sbjct: 41 SAHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIY 90
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Frame = +3
Query: 246 IASHKLVLSVCSPYFQEMF----KMNPTQHPIVFLKD------VSHSALRDLLQFMYQGE 395
+ H+ +L+ S +FQ++F K++ T+ P L++ V+H A L ++Y G
Sbjct: 71 VGVHRCILAARSKFFQDLFKKEKKISKTEKPKYQLREMLPYGAVAHEAFLYFLSYIYTGR 130
Query: 396 V 398
+
Sbjct: 131 L 131
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 252 SHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 386
+HKL+L+ SP F+ F + + + D+ S + +L F+Y
Sbjct: 207 AHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIY 253
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,848,827
Number of Sequences: 28952
Number of extensions: 208932
Number of successful extensions: 435
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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