Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1210
         (270 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7D61 Cluster: PREDICTED: similar to purity of ...    36   0.18 
UniRef50_A0LF33 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_A6LGW2 Cluster: Putative outer membrane protein; n=1; P...    31   6.6  
UniRef50_A7RR77 Cluster: Predicted protein; n=2; Nematostella ve...    30   8.8  

>UniRef50_UPI0000DB7D61 Cluster: PREDICTED: similar to purity of
            essence CG14472-PA, partial; n=1; Apis mellifera|Rep:
            PREDICTED: similar to purity of essence CG14472-PA,
            partial - Apis mellifera
          Length = 2777

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = +1

Query: 25   NMSATAFSTFVGNVVVDLAAWLAGDVPHA--EWRRLVSCRXXXXXXXXXXXXX--RDLYL 192
            N+ + A    +  + +D+  WL GD  H+  EW R +  R               R LYL
Sbjct: 1638 NIESLATIQPIEGITIDVNKWLNGDSKHSYSEWIRRMPTRKIEQSSGKPMKKEETRALYL 1697

Query: 193  AHKYVSKWREKMLFSHG 243
              KY  +W  + L  HG
Sbjct: 1698 MEKYGHRWHNRCLRQHG 1714


>UniRef50_A0LF33 Cluster: Putative uncharacterized protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Putative
           uncharacterized protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 104

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = -2

Query: 116 HSACGTSPASH------AARSTTTLPTNVENAVADMLFGAGLCS 3
           H ACG  PA H      AA  +++LP+    AV   L GA +CS
Sbjct: 7   HRACGNFPAVHFVRLFTAASVSSSLPSPASRAVLAFLTGAWVCS 50


>UniRef50_A6LGW2 Cluster: Putative outer membrane protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative outer
           membrane protein - Parabacteroides distasonis (strain
           ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 399

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 19  PNNMSATAFSTFVGNVVVDLAAWLAGDVPHAEW 117
           P++        F+G+   DL  W++GD  H +W
Sbjct: 351 PDDFKYPVEHAFIGDAYPDLLKWVSGDSKHVQW 383


>UniRef50_A7RR77 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 240

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 182 TCILRTNTLASGGRRCCFL 238
           TC+LRT+T  SGGR  C L
Sbjct: 20  TCLLRTHTCNSGGRSTCLL 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,052,280
Number of Sequences: 1657284
Number of extensions: 2122482
Number of successful extensions: 6703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6703
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)