Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1210
         (270 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   2.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   5.4  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = +2

Query: 182 TCIL-RTNTLASGGRRCCFLTGMLPSH 259
           +C L RT  L S G    FLT   P H
Sbjct: 233 SCYLERTELLRSSGETRLFLTHRKPFH 259


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 233 NSIFSLHLLTYL 198
           NS++SLHLL ++
Sbjct: 248 NSLYSLHLLLWI 259


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 3    GTESGPEQHVCD 38
            G    PE+H+CD
Sbjct: 1237 GLHYNPEEHMCD 1248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 227 IFSLHLLTYLC 195
           IF++HLL  LC
Sbjct: 274 IFTMHLLFLLC 284



 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 227 IFSLHLLTYLC 195
           IF++HLL  LC
Sbjct: 122 IFTVHLLFLLC 132



 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 227 IFSLHLLTYLC 195
           IF++HLL  LC
Sbjct: 155 IFTVHLLFLLC 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,564
Number of Sequences: 336
Number of extensions: 498
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)