Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1210
         (270 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199...    27   2.7  
12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781     26   4.7  
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337...    25   6.3  
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916...    25   8.3  
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973...    25   8.3  
05_05_0051 + 21923402-21923763,21923861-21923951,21924048-219241...    25   8.3  

>04_03_0819 + 20018496-20019487,20019587-20019721,20019834-20019978,
            20020135-20020416,20020649-20020910,20021028-20021224,
            20021315-20021425,20022341-20022392,20022442-20022584,
            20023121-20023210,20023300-20023800,20024108-20024176,
            20024866-20025011,20025475-20025530,20026140-20026286,
            20027405-20027530,20027608-20027876,20028026-20028127
          Length = 1274

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 70   VDLAAWLAGDVPHAEW 117
            VD   WLAGDV +A W
Sbjct: 1053 VDQVTWLAGDVFYARW 1068


>12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781
          Length = 609

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 94  GDVPHAEWRRL 126
           GD+PHA+WR L
Sbjct: 38  GDIPHAQWRGL 48


>12_02_0982 -
           25031778-25032122,25032388-25032534,25032693-25033718,
           25033758-25034227,25034393-25034471
          Length = 688

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +1

Query: 94  GDVPHAEWRRL---VSCRXXXXXXXXXXXXXRDLYLAHKYVSKWREKMLFSHGHASVS 258
           GDVPHA WR L   V  R               L+ + +++  WR + L+ H    VS
Sbjct: 108 GDVPHAGWRGLPDDVVARVLVHLPVVDLFRLGYLF-SPRWLDIWRAEPLYLHDRQFVS 164


>07_03_0603 -
           19890664-19890823,19891104-19891329,19891498-19891636,
           19891849-19891942,19892291-19892311,19892506-19892941,
           19893133-19893280,19893369-19893476,19893543-19893659,
           19893960-19894016,19894488-19894553,19895140-19895328,
           19895410-19895523,19895684-19895766,19895857-19896322,
           19896832-19897476
          Length = 1022

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFG 18
           SACG +P++ AAR T   P +      D + G
Sbjct: 111 SACGCAPSAAAARVTRDAPAHGVQGKRDAVDG 142


>06_03_1514 +
           30696632-30696724,30696857-30697009,30697226-30697309,
           30697451-30697569,30697769-30697870,30699071-30699190,
           30699285-30699350,30699563-30699629,30699720-30699773,
           30700379-30700534,30701130-30701228
          Length = 370

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 213 VEGEDAVFSRACFRLIW 263
           VEG   VFSRA +R +W
Sbjct: 248 VEGMAPVFSRAAWRCVW 264


>05_05_0051 +
           21923402-21923763,21923861-21923951,21924048-21924196,
           21924279-21924522,21924664-21924768,21924842-21925024,
           21925118-21925319,21925896-21926372,21926680-21926771,
           21927265-21927444
          Length = 694

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 116 HSACGTSPASHAARSTTTLPTNVENAVADMLFGAG 12
           H   GT P +   RST  LP N  +A  D LF  G
Sbjct: 564 HDFLGTLPVTWF-RSTDQLPINARDASDDPLFPFG 597


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,588,068
Number of Sequences: 37544
Number of extensions: 69193
Number of successful extensions: 191
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)