Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1210
         (270 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64429-1|CAA45771.1|  515|Drosophila melanogaster binding factor...    27   4.7  
M87038-1|AAA28427.1|  516|Drosophila melanogaster CREB-A protein.      27   4.7  
BT025219-1|ABF17910.1|  516|Drosophila melanogaster FI01021p pro...    27   4.7  
BT021243-1|AAX33391.1|  320|Drosophila melanogaster RE64328p pro...    27   4.7  
BT011074-1|AAR82739.1|  296|Drosophila melanogaster SD14261p pro...    27   4.7  
AE014296-2531|AAS64997.1|  516|Drosophila melanogaster CG7450-PB...    27   4.7  
AE014296-2530|AAF49621.2|  516|Drosophila melanogaster CG7450-PA...    27   4.7  

>X64429-1|CAA45771.1|  515|Drosophila melanogaster binding factor-2
           box B protein.
          Length = 515

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 221 SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 256


>M87038-1|AAA28427.1|  516|Drosophila melanogaster CREB-A protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 221 SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 256


>BT025219-1|ABF17910.1|  516|Drosophila melanogaster FI01021p
           protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 221 SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 256


>BT021243-1|AAX33391.1|  320|Drosophila melanogaster RE64328p
           protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 25  SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 60


>BT011074-1|AAR82739.1|  296|Drosophila melanogaster SD14261p
           protein.
          Length = 296

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 1   SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 36


>AE014296-2531|AAS64997.1|  516|Drosophila melanogaster CG7450-PB,
           isoform B protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 221 SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 256


>AE014296-2530|AAF49621.2|  516|Drosophila melanogaster CG7450-PA,
           isoform A protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 113 SACGTSPASHAARSTTTLPTNVENAVADMLFGAGLC 6
           S+C  SP S A+ S   L  N+ +  ++MLF    C
Sbjct: 221 SSCPASPTSQASSSQHQLSLNLAHLQSEMLFEPKHC 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,817,513
Number of Sequences: 53049
Number of extensions: 101942
Number of successful extensions: 321
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 24,988,368
effective HSP length: 68
effective length of database: 21,381,036
effective search space used: 449001756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)