Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1207
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 186 1e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 186 1e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 185 2e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 185 2e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 183 1e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 4e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 120 1e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 120 1e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 118 2e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 118 2e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 100 9e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 6e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 72 3e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.005
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.005
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.36
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.9
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 29 2.5
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.4
Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 27 7.7
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 27 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 125
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 155
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 41
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 94/114 (82%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S V + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEG 169
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 185 bits (451), Expect = 2e-47
Identities = 93/114 (81%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S + + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEG 169
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (451), Expect = 2e-47
Identities = 93/114 (81%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYVAIQAV S + + V+ T VPIYEG
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEG 169
Score = 117 bits (281), Expect = 7e-27
Identities = 51/55 (92%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 91/114 (79%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPVPIYEG 595
REKMTQIMFETFNTPAMYV IQAV S + T V+ T VPIYEG
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEG 168
Score = 113 bits (272), Expect = 9e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (291), Expect = 4e-28
Identities = 50/84 (59%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 436
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
RE+ +I FETFN PA+Y+ +QAV
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAV 143
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFI 57
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSH 573
+SLYA+GRTTG+VLDSGDGV+H
Sbjct: 144 LSLYATGRTTGVVLDSGDGVTH 165
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 120 bits (288), Expect = 1e-27
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 346
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 118 bits (285), Expect = 2e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDM 337
DEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 100 bits (239), Expect = 9e-22
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 394
R G + L+ +E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 395 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAV
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAV 143
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSH 573
++LYA G TG+V+DSGDGV+H
Sbjct: 144 LTLYAQGLLTGVVVDSGDGVTH 165
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.5 bits (232), Expect = 6e-21
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 257 DEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
DEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 69 DEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPE 128
Query: 434 NREKMTQIMFETFNTPAMYVAIQAVSRCT 520
NRE +IMFE+FN P +Y+A+QAV T
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALT 157
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 535 TGIVLDSGDGVSH 573
TG+V+DSGDGV+H
Sbjct: 171 TGLVIDSGDGVTH 183
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +2
Query: 302 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 481
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 482 AMYVAIQAVSRC 517
A Y++ V C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
++E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 434 NREKMTQIMFETF 472
+ ++I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 254 RDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 433
++E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 48 QEECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPA 105
Query: 434 NREKMTQIMFETF 472
+ ++I+F+ F
Sbjct: 106 LPDVSSEILFDYF 118
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 383 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPAT 562
P P + +P P T + T +T A + S T P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 563 VSPT 574
+ T
Sbjct: 689 TTST 692
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 383 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPAT 562
P P + +P P T + T +T A + S T P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 563 VSPT 574
+ T
Sbjct: 745 TTST 748
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -3
Query: 351 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSLHKSPSVPYRPSRPDG 208
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEGLLCRDEAQSKRG 280
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 467 TFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPT 574
T +T A + S T P VPPV+ TP T + T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTST 571
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 437 REKMTQIMFETFN------TPAMYVAIQAVSRCTRPVVPPVSCWTPATVS 568
R++ Q+ F+T + TP + VA+ C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 437 REKMTQIMFETFN------TPAMYVAIQAVSRCTRPVVPPVSCWTPATVS 568
R++ Q+ F+T + TP + VA+ C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 593 LRKWARVWETPSP-ESSTIPVVRPDAYSETRL 501
LR+ AR+ P ++ +P +RPDAY+E R+
Sbjct: 197 LREGARLQSLRDPYRNAGVPFLRPDAYTEARI 228
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 593 LRKWARVWETPSP-ESSTIPVVRPDAYSETRL 501
LR+ AR+ P ++ +P +RPDAY+E R+
Sbjct: 197 LREGARLQSLRDPYRNAGVPFLRPDAYTEARI 228
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 498
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 498
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 498
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 373 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 498
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical
protein T16H12.4 protein.
Length = 376
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 462 SKHSTRPPCTSPSKPCLAVRVRSYHRYRAGLRRRCLPHP 578
SKH T PP ++ S C A+ V H R C+ HP
Sbjct: 237 SKH-TLPPSSAKSSECNAIHVGFPHHELITTRSFCVCHP 274
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 383 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPAT 562
P E P ++ P +P + + Q+ T P A A S T P+ P + P T
Sbjct: 1499 PAEIPRVVV--PQSPGTPQPVVPQVSIVTPQAPQPTAA--ATSASTGPIAPEPTTAAPTT 1554
Query: 563 VSPTPVP 583
TP+P
Sbjct: 1555 TETTPLP 1561
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 466 NIQHARHVRRHPSRVSLYASGRTTGIVLDS 555
N Q+ H HP +S YASGR+ + L S
Sbjct: 446 NRQYRVHTAMHPIAISDYASGRSVYLHLQS 475
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 466 NIQHARHVRRHPSRVSLYASGRTTGIVLDS 555
N Q+ H HP +S YASGR+ + L S
Sbjct: 446 NRQYRVHTAMHPIAISDYASGRSVYLHLQS 475
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,753,362
Number of Sequences: 27780
Number of extensions: 376195
Number of successful extensions: 1608
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -