Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1205
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QWH0 Cluster: Contig An11c0200, complete genome; n=1;...    40   0.050
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.1  
UniRef50_Q1L954 Cluster: Novel protein similar to vertebrate G p...    34   2.5  
UniRef50_A6RF80 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   5.8  
UniRef50_Q83B01 Cluster: Putative uncharacterized protein; n=6; ...    32   7.6  
UniRef50_Q7RQZ5 Cluster: Putative uncharacterized protein PY0094...    32   7.6  
UniRef50_A2DDS1 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  

>UniRef50_A2QWH0 Cluster: Contig An11c0200, complete genome; n=1;
           Aspergillus niger|Rep: Contig An11c0200, complete genome
           - Aspergillus niger
          Length = 492

 Score = 39.5 bits (88), Expect = 0.050
 Identities = 30/92 (32%), Positives = 36/92 (39%)
 Frame = -1

Query: 287 SCNKNQNPQNYICVITGGRTSCESARVGTTALPISAVCSNAFRFEGWGSRCNYTATLKLI 108
           SC K   P N    IT GR  C   R  T A+     C N+F  +         ATL L 
Sbjct: 279 SCGKFILPHN----ITAGRAQCPHCRSDTCAM-----CKNSFHTDDCVEDAELQATLALA 329

Query: 107 SQGGWRHLRCRCLWARVTTYHQVGCELVHQCK 12
           S  GW+    RC   R      +GC  +  CK
Sbjct: 330 STQGWQ----RCFRCRALVDLGIGCYHITYCK 357


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 200 WYLPVRTHKRSYHQ 241
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q1L954 Cluster: Novel protein similar to vertebrate G
           protein-coupled receptor 41; n=2; Danio rerio|Rep: Novel
           protein similar to vertebrate G protein-coupled receptor
           41 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 292

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +3

Query: 285 RCYSFTVEVNREHLLSTYFIRKILRQVFFFLPLLIALRGYFSFIK 419
           RCYS   +  +E L     IR  +  +FFFLPLLI    Y SFI+
Sbjct: 183 RCYS---KFTKEQLKELLPIRLSIAVLFFFLPLLICCFFYVSFIR 224


>UniRef50_A6RF80 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 337

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 239 GGRTSCESARVGTTALPISAVCSNAFRFEGWGSRCNYTATLKLISQGGWRH 87
           G  ++C  AR      P S  C N   + G   +C++  T K  S+  WRH
Sbjct: 121 GPFSTCVVARTSNGEYPSSGACGNCI-WRGLACKCSFRDTFKGNSEEEWRH 170


>UniRef50_Q83B01 Cluster: Putative uncharacterized protein; n=6;
           Coxiella burnetii|Rep: Putative uncharacterized protein
           - Coxiella burnetii
          Length = 747

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 8   IAYIGERAHNLPGDKWLLEPIDIYNVNAATHLEILVLRSQYSYNDYPTLQ 157
           +A+I  +   L   KWLL  ++  +V A  H + L+  S +SY D PTL+
Sbjct: 212 LAHIAAQNSQLETLKWLLSTVENLDVFADIHGQTLLRVSLHSYIDDPTLK 261


>UniRef50_Q7RQZ5 Cluster: Putative uncharacterized protein PY00942;
            n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00942 - Plasmodium yoelii yoelii
          Length = 1704

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 291  YSFTVEVNREHLLS-TYFIRKILRQVFFFLPLLIALRGYFSFIKSIELVGMKKSKYRNTY 467
            Y + ++ N  +++  T  + +  +  FFFL  +   +  F F+K  E VG++ +K +  Y
Sbjct: 958  YKYNIDRNNMNIIKLTNEVTEHFKNSFFFLDKIFIPKDAFFFVKDSEDVGIRNNKNKPVY 1017

Query: 468  I 470
            +
Sbjct: 1018 V 1018


>UniRef50_A2DDS1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 799

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 65  PIDIYNVNAATHLE-ILVLRSQYSYNDYPTL 154
           P++++N   + HL+  L LRS Y Y +Y TL
Sbjct: 108 PVELFNAEISNHLQRALALRSYYEYRNYRTL 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,949,306
Number of Sequences: 1657284
Number of extensions: 10071057
Number of successful extensions: 24971
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24954
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)