Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1205
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 512 CLNMYCVCMYVLN 474
           C N YC C +V+N
Sbjct: 498 CENEYCECTHVVN 510


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 17  IGERAHNLPGDKW 55
           + E   NLPG+KW
Sbjct: 72  LSEALTNLPGEKW 84


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 426 ELVGMKKSKYRNTYIR 473
           E+ G+   KYR TY R
Sbjct: 384 EIFGLVNLKYRETYFR 399



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 542  KCFSGTYLIKCLNMYCVCMYVLNTYVCISVF 450
            +CF  + +  C N+   C+Y+     C+  F
Sbjct: 1114 RCFFPSKIRICWNVLLNCVYLFLCGFCVYEF 1144


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 6   LLLTLVNELTTYLVI 50
           LL ++V  +TTYLVI
Sbjct: 366 LLYSIVGAVTTYLVI 380


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 326 QMFTIDFHGEGITSCNKNQNPQNYICVITGG 234
           Q+ TIDF      +CN   NP   I  +  G
Sbjct: 335 QVQTIDFGRPATFTCNFEGNPIKTISWLKDG 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,362
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)