Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1204
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.72 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 588 AIQAAQTVGKGRSGAGPLR 532
           A+Q  Q  G GR G GP R
Sbjct: 318 AVQVPQLAGGGRRGPGPAR 336


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 269 LHVYHELLFELTDKPDL 219
           L  Y ELL  L+DKP+L
Sbjct: 423 LSAYGELLHALSDKPEL 439


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 355 IDLCVRCYPRGGARYPIR 408
           +DLCVR  P     YP R
Sbjct: 15  LDLCVRKRPHSPEPYPPR 32


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 297 LSPATKPVLLTNKRGHAQG 353
           LSP  +P+L+T ++  A+G
Sbjct: 240 LSPVHEPLLITTEKLAAEG 258


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 357 NVLERGLFC 331
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 586 HSGCANCWER 557
           HSGC+ C E+
Sbjct: 72  HSGCSKCTEK 81


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 495 PCSTSPFASWRNSEEAPHPIA 557
           PC      +WR +   PH +A
Sbjct: 589 PCRPREQLTWRRNFHGPHRLA 609


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 495 PCSTSPFASWRNSEEAPHPIA 557
           PC      +WR +   PH +A
Sbjct: 481 PCRPREQLTWRRNFHGPHRLA 501


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,550
Number of Sequences: 336
Number of extensions: 3020
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)