Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1204
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 115 1e-25
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 115 1e-25
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 115 1e-25
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 115 1e-25
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 115 1e-25
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 115 1e-25
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 2.1
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 31 4.7
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 30 6.3
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 30 6.3
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 30 6.3
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 30 6.3
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 30 6.3
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 30 6.3
BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 30 6.3
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 30 6.3
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 30 6.3
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 30 6.3
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 30 6.3
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 30 6.3
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 30 6.3
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 30 6.3
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 30 6.3
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 8.3
AK124174-1|BAC85795.1| 184|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 8.3
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKF 87
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKF 85
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 83 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 129
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKF 87
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKF 87
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKF 87
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 115 bits (277), Expect = 1e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 185
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
P+P+LK+FQKIQ+RLVRELEKKF
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKF 87
Score = 74.9 bits (176), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
K+ GKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILE
Sbjct: 85 KKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILE 131
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 4.7
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 21 IKASGAEADSFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 185
+K E D+ + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 186 PMPKLKAFQKIQIRLVRELE 245
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
variant 5 protein.
Length = 1215
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
variant 2 protein.
Length = 1178
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 552 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608
>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
variant 7 protein.
Length = 1149
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
variant 6 protein.
Length = 1144
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
transcript variant 8 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
protein.
Length = 1076
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 587 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643
>BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein
protein.
Length = 627
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 444 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500
>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
Length = 1144
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 564 GKGRSGAGPLRYYASWRKGMCCKAIKLGNARVFPVTTVVKRRPVNCNTTHYRANWVPGPP 385
G+G+S P R W G+ + + P+ R P+ C+T H +A PGP
Sbjct: 19 GEGQSRLVPGRGLVLWLPGLPRSSPSWPAVDLAPLAPARPRGPLICHTGHEQAGREPGPG 78
Query: 384 S 382
S
Sbjct: 79 S 79
>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
protein.
Length = 1220
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
protein.
Length = 1220
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 251
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 29.9 bits (64), Expect = 8.3
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 54 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 227
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 228 LVRELEKKFVVNM*SLLETVRSCLSPATKPVLLTNKRGHAQ 350
+RELEK ++LE L K ++ ++RG Q
Sbjct: 1509 QIRELEKDRETQR-NVLE--HQLLELEKKDQMIESQRGQVQ 1546
>AK124174-1|BAC85795.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ42180 fis, clone THYMU2031258, moderately
similar to Homo sapiens oxysterol-binding
protein-related protein ).
Length = 184
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 492 SPCSTSPFASWRNSEEAPHPIALSQQFAQPEWLNW--QICKALNILL 626
+P S+S +WR S EAP P + S + E W C N+++
Sbjct: 10 TPSSSSGAKAWRRSPEAPSPWSCSSECRHNEAYTWTNPTCCVHNVII 56
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 29.9 bits (64), Expect = 8.3
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 54 ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQK--IQIR 227
+ + +A +EL + DLK + +E+ + + + EL +S++ ++PM + QK +Q
Sbjct: 1450 QREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQRE 1508
Query: 228 LVRELEKKFVVNM*SLLETVRSCLSPATKPVLLTNKRGHAQ 350
+RELEK ++LE L K ++ ++RG Q
Sbjct: 1509 QIRELEKDRETQR-NVLE--HQLLELEKKDQMIESQRGQVQ 1546
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,165,767
Number of Sequences: 237096
Number of extensions: 2118061
Number of successful extensions: 4779
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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