Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1204
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   114   1e-25
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   114   1e-25
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   114   1e-25
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   114   1e-25
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   114   1e-25
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   114   1e-25
U87925-1|AAC47487.1|  448|Drosophila melanogaster D-cbl protein.       29   4.2  
AY118593-1|AAM49962.1|  448|Drosophila melanogaster LD46082p pro...    29   4.2  
AJ223175-1|CAA11149.1|  448|Drosophila melanogaster cbl protein.       29   4.2  
AE014296-1455|AAF50417.1|  448|Drosophila melanogaster CG7037-PA...    29   4.2  
AE014134-1504|AAN10666.1|  108|Drosophila melanogaster CG31894-P...    28   9.6  

>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 6   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 185
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 186 PMPKLKAFQKIQIRLVRELEKKF 254
           P+P+ K FQKIQI LVRELEKKF
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKF 85



 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +2

Query: 245 KEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 385
           K+  GKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>U87925-1|AAC47487.1|  448|Drosophila melanogaster D-cbl protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +2

Query: 173 HHLCADA*TEGLSEDPDQACP*ARKEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 352
           H LC    T    +   Q CP  R E++G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 353 TLTSV 367
             T V
Sbjct: 444 DDTEV 448


>AY118593-1|AAM49962.1|  448|Drosophila melanogaster LD46082p
           protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +2

Query: 173 HHLCADA*TEGLSEDPDQACP*ARKEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 352
           H LC    T    +   Q CP  R E++G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 353 TLTSV 367
             T V
Sbjct: 444 DDTEV 448


>AJ223175-1|CAA11149.1|  448|Drosophila melanogaster cbl protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +2

Query: 173 HHLCADA*TEGLSEDPDQACP*ARKEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 352
           H LC    T    +   Q CP  R E++G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 353 TLTSV 367
             T V
Sbjct: 444 DDTEV 448


>AE014296-1455|AAF50417.1|  448|Drosophila melanogaster CG7037-PA,
           isoform A protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +2

Query: 173 HHLCADA*TEGLSEDPDQACP*ARKEVRGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 352
           H LC    T    +   Q CP  R E++G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 353 TLTSV 367
             T V
Sbjct: 444 DDTEV 448


>AE014134-1504|AAN10666.1|  108|Drosophila melanogaster CG31894-PA
           protein.
          Length = 108

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 441 RPVNCNTTHYRANWVPGPPSRIASYTEVNVLERGLFCLLA-TRVLWLGLGRILRS 280
           RP     +H R   +P PPS   S    +    G +C +   ++LW  +   L S
Sbjct: 45  RPGESTASHIRTIHMPAPPSNSTSTFNRSTRTTGTWCAICKLKILWESISDSLAS 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,006,779
Number of Sequences: 53049
Number of extensions: 614149
Number of successful extensions: 1734
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)