Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1201
         (316 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ786388-1|CAH10151.1|  108|Homo sapiens transforming growth fac...    28   5.0  
D89060-1|BAA23670.1|  456|Homo sapiens oligosaccharyltransferase...    27   8.8  
D29643-1|BAA06126.1|  456|Homo sapiens KIAA0115 protein.               27   8.8  
BC002594-1|AAH02594.1|  456|Homo sapiens dolichyl-diphosphooligo...    27   8.8  
AL391357-10|CAH73476.1|  456|Homo sapiens dolichyl-diphosphoolig...    27   8.8  
AB062391-1|BAB93478.1|  439|Homo sapiens dolichyl-diphosphooligo...    27   8.8  

>AJ786388-1|CAH10151.1|  108|Homo sapiens transforming growth factor
           beta receptor type IIC protein.
          Length = 108

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 69  LGLVTLINKNLCQKKKREQQHFVRFT*YAYYNTLQPTLNTVFIYKNTSVILSHPLEVLL 245
           +G    + ++ CQ    E  H ++   +  YNT  P L  V I++ T + L  PL V +
Sbjct: 21  IGSNNRLQRSTCQNTGWESAHVMKTPGFREYNTSNPDLLLV-IFQVTGISLLPPLGVAI 78


>D89060-1|BAA23670.1|  456|Homo sapiens oligosaccharyltransferase
           protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 91  IKIFVKKKNGNNNISFVLPNMH----ITIPYNLH*ILYLFTRTQ 210
           ++ F+KKK G  ++ F LP+++      + YN     +L++ TQ
Sbjct: 364 VRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQ 407


>D29643-1|BAA06126.1|  456|Homo sapiens KIAA0115 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 91  IKIFVKKKNGNNNISFVLPNMH----ITIPYNLH*ILYLFTRTQ 210
           ++ F+KKK G  ++ F LP+++      + YN     +L++ TQ
Sbjct: 364 VRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQ 407


>BC002594-1|AAH02594.1|  456|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 91  IKIFVKKKNGNNNISFVLPNMH----ITIPYNLH*ILYLFTRTQ 210
           ++ F+KKK G  ++ F LP+++      + YN     +L++ TQ
Sbjct: 364 VRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQ 407


>AL391357-10|CAH73476.1|  456|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 91  IKIFVKKKNGNNNISFVLPNMH----ITIPYNLH*ILYLFTRTQ 210
           ++ F+KKK G  ++ F LP+++      + YN     +L++ TQ
Sbjct: 364 VRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQ 407


>AB062391-1|BAB93478.1|  439|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +1

Query: 91  IKIFVKKKNGNNNISFVLPNMH----ITIPYNLH*ILYLFTRTQ 210
           ++ F+KKK G  ++ F LP+++      + YN     +L++ TQ
Sbjct: 347 VRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQ 390


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,811,870
Number of Sequences: 237096
Number of extensions: 593724
Number of successful extensions: 766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)