Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1201
         (316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003247-1|AAO25004.1|  194|Drosophila melanogaster LD34406p pro...    30   0.72 
AE014297-1289|AAF54630.1|  194|Drosophila melanogaster CG6719-PA...    30   0.72 
AE014296-1310|AAF50522.2|  972|Drosophila melanogaster CG8492-PA...    26   8.8  

>BT003247-1|AAO25004.1|  194|Drosophila melanogaster LD34406p
           protein.
          Length = 194

 Score = 29.9 bits (64), Expect = 0.72
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 96  NLCQKKKREQQHFVRFT*YAYYNTLQPTLNTVFIYKNTSVILSHPLE 236
           N+ +K+  E++     +   +  TL P   TV+++   SV+L +PL+
Sbjct: 87  NVLRKEDEERETQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLD 133


>AE014297-1289|AAF54630.1|  194|Drosophila melanogaster CG6719-PA
           protein.
          Length = 194

 Score = 29.9 bits (64), Expect = 0.72
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 96  NLCQKKKREQQHFVRFT*YAYYNTLQPTLNTVFIYKNTSVILSHPLE 236
           N+ +K+  E++     +   +  TL P   TV+++   SV+L +PL+
Sbjct: 87  NVLRKEDEERETQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLD 133


>AE014296-1310|AAF50522.2|  972|Drosophila melanogaster CG8492-PA
           protein.
          Length = 972

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 299 HLNTESVFKR*NFKLNAPQQNLKRVAQNYACVLVNKYSI*CR 174
           +++++S     N+  N P       + NY+C+    YS  CR
Sbjct: 804 YVSSDSFRNESNYSSNYPSNYPPNYSYNYSCICFPNYSSNCR 845


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,504,163
Number of Sequences: 53049
Number of extensions: 206452
Number of successful extensions: 306
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)