Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1200
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.64 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   6.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.9  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    21   7.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 139 CNSCFSGTGSPNKTGNFIHR 198
           C+ C+S  G+ +K G  IH+
Sbjct: 298 CDVCYSTIGTVSKAGELIHQ 317



 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 139 CNSCFSGTGSPNKTGNFIHR 198
           C+ C+S     +K+G  IH+
Sbjct: 926 CHVCYSTIQEVSKSGELIHK 945


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 139 CNSCFSGTGSPNKTGNFIHR 198
           C+ C+S     NK G  IH+
Sbjct: 577 CDVCYSTIEEANKAGELIHK 596


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 139 CNSCFSGTGSPNKTGNFIHR 198
           C+ C+S     NK G  IH+
Sbjct: 302 CDVCYSTIEEANKAGELIHK 321


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 253 SFEGLPIRRLH 221
           SFE LP RRLH
Sbjct: 52  SFESLPNRRLH 62


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 164 PVPLKQLLQNSLFAPEPICRRSATFLIYLYV 72
           P+PL  +   ++  P  IC  SA  LI++ V
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV 211


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 164 PVPLKQLLQNSLFAPEPICRRSATFL 87
           P+PL  +   ++  P  IC  +A  L
Sbjct: 182 PLPLPPIFAPTMINPSAICESAAQLL 207


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 131 LFAPEPICRRSATFLIYLYVPKY--TDKIISYSYRHKFI 21
           +F PEP+C R        YV ++    +II    R  FI
Sbjct: 234 VFRPEPLCERLFEASREEYVTRHLIDGRIIGCDQRISFI 272


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 510 LSIQITEIRVLVWF 469
           + I +TE R+ VWF
Sbjct: 32  MKIGLTEARIQVWF 45


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 434 PI*LAWRRWTTANHTRTRISVICMLNKKPTVSTAGWARQDPRECFWPP 577
           P  L  +R +T+N T +  SV+   +  PT ++ G     P     PP
Sbjct: 81  PSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPP 128


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 327 LHSFVHICFVGMLDLSYNLAI 265
           LH F   C++ +L L  N+A+
Sbjct: 169 LHEFYGFCYLWVLILICNIAL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,829
Number of Sequences: 336
Number of extensions: 3040
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)