Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1200
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106575-1|AAC78174.2|  537|Caenorhabditis elegans Aldehyde dehy...    97   8e-21
U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde dehydr...    96   2e-20
U12966-2|AAN63391.1|  422|Caenorhabditis elegans Aldehyde dehydr...    69   3e-12
Z68760-14|CAA92998.2|  908|Caenorhabditis elegans Hypothetical p...    44   6e-05
Z68748-13|CAA92957.2|  908|Caenorhabditis elegans Hypothetical p...    44   6e-05
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    39   0.003
AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde dehy...    34   0.088
AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde dehy...    34   0.088
Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U00051-9|AAM29693.1|  503|Caenorhabditis elegans Aldehyde dehydr...    28   4.4  
U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde dehydr...    28   4.4  
AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical ...    27   7.7  

>AF106575-1|AAC78174.2|  537|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 2 protein.
          Length = 537

 Score = 97.1 bits (231), Expect = 8e-21
 Identities = 48/92 (52%), Positives = 60/92 (65%)
 Frame = +1

Query: 256 NPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIERDRT 435
           NPANG+++A+V                  FK+GS WR MDAS RG L+N+LADL+ERDR 
Sbjct: 78  NPANGKLLAKVAEGNRDDVDIAVEAAKKAFKIGSEWRRMDASHRGVLLNRLADLMERDRV 137

Query: 436 YLASLETLDNGKPYKDSYFGDLYA**KTYGIY 531
            LASLE+LDNGKPYK++Y  DL    KT+  Y
Sbjct: 138 ILASLESLDNGKPYKEAYNIDLPISIKTFRYY 169



 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 200 LFINNEWVKSSDGKTFK 250
           LFINNE+V +  GKTF+
Sbjct: 59  LFINNEFVDAKSGKTFE 75


>U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde
           dehydrogenase protein1, isoform a protein.
          Length = 510

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 54/121 (44%), Positives = 68/121 (56%)
 Frame = +1

Query: 169 PNKTGNFIHRSLHKQ*VGEVF*WEDLQN*NPANGQVIAEVQHXXXXXXXXXXXXXXXXFK 348
           P  TG FI+        G+ F     +  NPANG+V+A+V                  F+
Sbjct: 27  PQYTGIFINNEFVPAKSGKTF-----ETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFR 81

Query: 349 LGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYA**KTYGI 528
           +GS WR MDAS+RG L+N+LADL+ERDR  LASLE+LDNGKPY  +Y  DL    KT   
Sbjct: 82  IGSEWRRMDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRY 141

Query: 529 Y 531
           Y
Sbjct: 142 Y 142


>U12966-2|AAN63391.1|  422|Caenorhabditis elegans Aldehyde
           dehydrogenase protein1, isoform b protein.
          Length = 422

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = +1

Query: 370 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYA**KTYGIY 531
           MDAS+RG L+N+LADL+ERDR  LASLE+LDNGKPY  +Y  DL    KT   Y
Sbjct: 1   MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYY 54


>Z68760-14|CAA92998.2|  908|Caenorhabditis elegans Hypothetical
           protein F36H1.6 protein.
          Length = 908

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 27/74 (36%), Positives = 36/74 (48%)
 Frame = +1

Query: 256 NPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIERDRT 435
           NPA  + I E+                  F+ G  WR M A ERG  + KLA+L+E  + 
Sbjct: 449 NPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSARERGKRLYKLAELMEEHKE 507

Query: 436 YLASLETLDNGKPY 477
            LA+LE+LD G  Y
Sbjct: 508 ELATLESLDAGAVY 521



 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 203 FINNEWVKSSDGKTFKT 253
           FI+ ++V SSDG+TFKT
Sbjct: 431 FIDGKFVGSSDGRTFKT 447


>Z68748-13|CAA92957.2|  908|Caenorhabditis elegans Hypothetical
           protein F36H1.6 protein.
          Length = 908

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 27/74 (36%), Positives = 36/74 (48%)
 Frame = +1

Query: 256 NPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIERDRT 435
           NPA  + I E+                  F+ G  WR M A ERG  + KLA+L+E  + 
Sbjct: 449 NPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSARERGKRLYKLAELMEEHKE 507

Query: 436 YLASLETLDNGKPY 477
            LA+LE+LD G  Y
Sbjct: 508 ELATLESLDAGAVY 521



 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 203 FINNEWVKSSDGKTFKT 253
           FI+ ++V SSDG+TFKT
Sbjct: 431 FIDGKFVGSSDGRTFKT 447


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 361 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKP 474
           W+     +R AL+NK+A+LIE     +A LE+ D GKP
Sbjct: 79  WKKTTVQQRSALLNKVANLIEEFNDDIAILESRDQGKP 116


>AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform b protein.
          Length = 430

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 355 SPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKP 474
           S W    A +RG +++K+ADLI      +A  E   NGKP
Sbjct: 63  SAWGETTALDRGKVLHKVADLIREHAEEIAIWEVKTNGKP 102


>AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform a protein.
          Length = 499

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 355 SPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKP 474
           S W    A +RG +++K+ADLI      +A  E   NGKP
Sbjct: 63  SAWGETTALDRGKVLHKVADLIREHAEEIAIWEVKTNGKP 102


>Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical
           protein F45H10.1 protein.
          Length = 569

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +1

Query: 367 TMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDS 486
           T  A +RGA+++K  +++ +  T LA+L T + GKP  ++
Sbjct: 74  TYSAKQRGAILHKWFEILVQRETELATLLTKEQGKPLAEA 113


>Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical
           protein F13D12.4a protein.
          Length = 523

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 22/77 (28%), Positives = 31/77 (40%)
 Frame = +1

Query: 256 NPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIERDRT 435
           NPA  +VIA V +                F   + W+      R   + KL  LI+RD  
Sbjct: 51  NPATNEVIAMVPNATQAEMQAAVDSAKNAF---NTWKNTSPLTRQQCMFKLQALIKRDMK 107

Query: 436 YLASLETLDNGKPYKDS 486
            LA   T++ GK   D+
Sbjct: 108 KLAESITIEQGKTLPDA 124


>U00051-9|AAM29693.1|  503|Caenorhabditis elegans Aldehyde
           dehydrogenase protein11, isoform b protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 346 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDS 486
           K    W      ER  ++ K  DL++     +A  E + NGKP  ++
Sbjct: 70  KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEA 116


>U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde
           dehydrogenase protein11, isoform a protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 346 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDS 486
           K    W      ER  ++ K  DL++     +A  E + NGKP  ++
Sbjct: 254 KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEA 300


>AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical
           protein T01A4.3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 535 GGRYRRFFIKHTDHRNTSPCMVCRCPASP 449
           G  Y  F IK+ D  + S  M CRC   P
Sbjct: 550 GKLYHCFDIKNQDSTSVSDTMTCRCSMKP 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,038
Number of Sequences: 27780
Number of extensions: 299252
Number of successful extensions: 668
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)