Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1199
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 40 9e-04
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696... 40 0.001
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741... 38 0.006
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949... 36 0.014
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528... 36 0.025
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331... 33 0.100
03_06_0184 - 32188778-32188947,32189104-32189173,32189332-321894... 31 0.40
10_02_0127 + 5555226-5555446,5555475-5555500,5555702-5555790,555... 31 0.70
05_07_0022 - 27103367-27103533,27103783-27103852,27104074-271042... 30 1.2
03_06_0244 + 32613914-32614666 30 1.2
01_01_0526 - 3857824-3857866,3858097-3858176,3858257-3858424,385... 30 1.2
12_02_1220 + 27124834-27125418,27125849-27126280 29 1.6
04_03_0739 + 19180048-19182039 29 1.6
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 29 2.1
11_06_0533 + 24734177-24735787 29 2.8
04_04_1534 + 34200538-34200589,34200677-34200857,34201701-342018... 28 3.7
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 28 3.7
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207... 28 5.0
09_02_0589 + 10969195-10969325,10971135-10971607,10971894-109720... 27 6.5
10_08_0107 + 14855606-14855914,14856068-14856142,14856920-14857021 27 8.7
05_01_0554 + 4856131-4856605,4858051-4858098,4860611-4860792,486... 27 8.7
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 27 8.7
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 40.3 bits (90), Expect = 9e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -3
Query: 435 NAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
N AL+ R + L DL L V LW L+ VG+C + +TLI + + L T+P Y+
Sbjct: 167 NRALHLFREIALGHDLKKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYD 223
>01_01_0885 +
6966700-6966979,6967930-6968110,6968224-6968365,
6968448-6968517,6968617-6968783
Length = 279
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -3
Query: 435 NAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
N A LR++ L D+ L LW L+ +G+C N +TL+ + ++ L T+P YE
Sbjct: 181 NRAFANLRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLTLVYIVFVVLHTVPILYE 237
>05_06_0144 -
25973635-25973801,25973878-25973947,25974049-25974190,
25974647-25974827,25975248-25975443
Length = 251
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -3
Query: 435 NAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
N LR + DL L V LW L+ +G+C N +TL + ++ L+T+P YE
Sbjct: 153 NRGFATLREIGQGHDLKKFLIVVVGLWVLSVLGSCCNFLTLFYIVFMVLYTVPVLYE 209
>02_02_0367 +
9496893-9497022,9498262-9498442,9498519-9498660,
9498757-9498826,9498920-9499089
Length = 230
Score = 36.3 bits (80), Expect = 0.014
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -3
Query: 435 NAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAY 268
N AL+ LR + L DL+ L V LW L+ +G+ + +TL + + L T+P Y
Sbjct: 131 NQALHLLREISLGHDLMKFLGVIVALWILSEIGSLCDFLTLFYVAVLMLHTVPILY 186
>03_02_0927 -
12452262-12452428,12452538-12452607,12452689-12452830,
12452937-12453117,12454068-12454203
Length = 231
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 366 VLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+LLW L+ +G + ITL G IAL T+P Y N+
Sbjct: 156 LLLWLLSVIGNFCSSITLAYFGTIALVTIPALYSKNQ 192
>01_06_0631 +
30732091-30732292,30732690-30732870,30732994-30733135,
30733228-30733297,30733383-30733549
Length = 253
Score = 33.5 bits (73), Expect = 0.100
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -3
Query: 435 NAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
N LR + DL L LW L+ +G+ N +TL + ++AL+T+P YE
Sbjct: 155 NRGFATLREIGHGRDLKKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYE 211
>03_06_0184 -
32188778-32188947,32189104-32189173,32189332-32189473,
32189559-32189739,32189857-32190051,32190782-32190795,
32190815-32190864,32191493-32191519
Length = 282
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 360 LWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
LW +G N +T+I +G+++ TLP YE
Sbjct: 208 LWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYE 239
>10_02_0127 +
5555226-5555446,5555475-5555500,5555702-5555790,
5558112-5558843
Length = 355
Score = 30.7 bits (66), Expect = 0.70
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -2
Query: 415 AQTVPGGGPGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDSAVHAAEGLRDEQGQVDANL 236
A VPG P AE+R A G + A RLD+ AA+G + +A
Sbjct: 242 AHGVPGEAPAIAAEIRDCASASSSASGHAKETAAELARLDAMGDAAKGSQARWAVSNAKT 301
Query: 235 ELARAKINE 209
L+ A NE
Sbjct: 302 WLSAAMTNE 310
>05_07_0022 -
27103367-27103533,27103783-27103852,27104074-27104215,
27104372-27104552,27104654-27104756
Length = 220
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 360 LWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
LW L +G + TL+ +G++ TLP YE
Sbjct: 147 LWILAVIGETCSFTTLLYVGFLCALTLPALYE 178
>03_06_0244 + 32613914-32614666
Length = 250
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 418 AAQTVPGGGPGGLAEVRRAAV--VPHVRGGVLQRDHAHHPRLDSAVHAAEGLRDEQG 254
AA+T G PGG VRRAA + +RG +R A D A EG R E+G
Sbjct: 82 AARTPRRGTPGGGGGVRRAACAGLGPIRGA--ERIRARPSSPDDGGEAKEGWRGEEG 136
>01_01_0526 -
3857824-3857866,3858097-3858176,3858257-3858424,
3858542-3858643,3858973-3859125,3859865-3859993,
3860115-3860204,3860759-3860839
Length = 281
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = -2
Query: 400 GGGPGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDSAVHAAEGLRDEQGQVDANLELAR- 224
G G G L++ R ++ R A H L HA + L D Q N+E+ R
Sbjct: 207 GDGEGALSDAYRCRMMRPNWAKACYRQGAAHMLLKEYKHACDALMDAQKLDSGNVEIERE 266
Query: 223 -AKINEITAK 197
K E+ AK
Sbjct: 267 LRKARELMAK 276
>12_02_1220 + 27124834-27125418,27125849-27126280
Length = 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/73 (35%), Positives = 28/73 (38%)
Frame = -2
Query: 391 PGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDSAVHAAEGLRDEQGQVDANLELARAKIN 212
PGG A A PHV GG R H SA A D G + A +
Sbjct: 79 PGGGAATAAAGWSPHVTGGG-GRGHRPMSWNFSAASAQPTTEDSGGGGGGGVVPAPLQAM 137
Query: 211 EITAKVRAAVPLG 173
E TA RAAV G
Sbjct: 138 ETTATARAAVKKG 150
>04_03_0739 + 19180048-19182039
Length = 663
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -2
Query: 364 AAVVPHVRGGVLQRDHAHHPRLDSAVHAAEGLRDEQGQVDANLELA----RAKINEITAK 197
AA +P G V +R PR+D+A + R + + + LA + A
Sbjct: 16 AAKLPKPGGQVQRRRDRDRPRVDAAACTRDSRRPTRERCSTTVSLAATATATTATPVRAP 75
Query: 196 VRAAVPLGRRAEGD 155
VR P+G+R D
Sbjct: 76 VRTRAPMGQRKGAD 89
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 372 FGVLLWCLTYVGACFNGITLIILGW 298
FG+ WC+ Y G NG T+ W
Sbjct: 292 FGLKFWCIVYSGFACNGFTVFAQLW 316
>11_06_0533 + 24734177-24735787
Length = 536
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAKV 194
L +A AE LR E ++D +A AK+NE+ ++
Sbjct: 314 LAAAKTEAEKLRSEVAEIDEKHRMAEAKVNELQIEI 349
>04_04_1534 +
34200538-34200589,34200677-34200857,34201701-34201842,
34201963-34202032,34202169-34202302
Length = 192
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 378 LKFGVLLWCLTYVGACFNGITLIIL 304
+K ++LW ++Y+G FN +TLI +
Sbjct: 124 IKVILILWVVSYIGMLFNFLTLIYI 148
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 400 GGGPGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDS 293
GG GG A+ R + HV G V Q HHP+L S
Sbjct: 292 GGSAGGGADGSRYWLAIHVVGVVRQTFTNHHPKLCS 327
>01_01_0255 +
2079112-2079196,2079334-2079514,2079712-2079853,
2079934-2080003,2080140-2080303
Length = 213
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 360 LWCLTYVGACFNGITLIILGWIALFTLPKAYE 265
L+ + + +CF+ +TL+ L + TLP YE
Sbjct: 141 LFIASVIASCFSSLTLLYLVVLGTMTLPVMYE 172
>09_02_0589 +
10969195-10969325,10971135-10971607,10971894-10972032,
10972645-10972722,10972886-10973055,10973199-10973467,
10973655-10973781,10973964-10974035,10975084-10975273,
10975480-10975879
Length = 682
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 256 LVHLVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELQRV 384
LV L+ ++R Y TED RD + E Q H ++ ++
Sbjct: 318 LVFLIWRQKRNSNYSTEDPTRDRSNQLENSLEKSQNHGDVLQI 360
>10_08_0107 + 14855606-14855914,14856068-14856142,14856920-14857021
Length = 161
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 283 AAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGRRAEGDKDK*T 140
AA L+D+ D + A A + A+ RAA RAE D+DK T
Sbjct: 50 AAGRLQDDDDDDDDDDADAAAAPAGLAARARAAADANARAERDEDKTT 97
>05_01_0554 +
4856131-4856605,4858051-4858098,4860611-4860792,
4861409-4863136
Length = 810
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 298 DSAVHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPL-GRRAEGDKD 149
+ AV A + R E V+ N+EL + + E+ AVP+ G + D +
Sbjct: 426 EEAVEANKASRLESEGVEVNVELQKEEATEVNEARSQAVPIVGNHVDDDNE 476
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 339 GACFNGITLIILGWIALFTLPKAYEMNKGRWTPTSSWRAPRSTRSPPRCA 190
G C G+ L +L W + + R PTS +PR SPP+ +
Sbjct: 19 GGCAGGVLLHLLDWHRRLARKRRL-FSPRRLLPTSLRSSPRRLPSPPQAS 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,691,145
Number of Sequences: 37544
Number of extensions: 151554
Number of successful extensions: 778
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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