Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1199
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 65 2e-11
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 0.84
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 0.84
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 30 0.84
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 30 0.84
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.84
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.84
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 1.5
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 29 2.6
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 3.4
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 3.4
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 3.4
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 5.9
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 5.9
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 5.9
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 5.9
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 27 7.8
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 27 7.8
U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine rec... 27 7.8
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 27 7.8
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 27 7.8
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 2393 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 2447
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 109 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 163
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 475 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 529
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 2389 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 2443
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 127 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 181
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 420 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNK 256
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+
Sbjct: 2512 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQ 2566
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAK 197
LDS + + + ++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAK 197
LDS + + + ++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAK 197
LDS + + + ++DAN+E RAKI+EI K
Sbjct: 396 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 430
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 30.3 bits (65), Expect = 0.84
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 274 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 381
+++RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 160 IKRREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAK 197
LDS + + + ++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 301 LDSAVHAAEGLRDEQGQVDANLELARAKINEITAK 197
LDS + + + ++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 289 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 402
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 274 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQ 390
+R+ + PT D+E P+E+RP R ++ LQRV +
Sbjct: 540 MRRLDSDRPT-DEEIPPIESRPQTRREIERDRLLQRVRE 577
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 635 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 682
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 565 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 612
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 380 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 427
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 424 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 471
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 565 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 612
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 482 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 529
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 298 PTEDDERDPVE---ARPHVREAPQQHAELQRVHQVLHQEQSAQLIQGG 432
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 750 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 797
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 357 WCLTYVGACFNGITLIILGWIALFTLPKAYEMNKGR 250
W VGA +I++ WI L+ + Y N GR
Sbjct: 192 WMTCIVGAVIGVYYMILISWIVLYIINIFYVNNMGR 227
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 289 VHAAEGLRDEQGQVDANLELARAKINEITAKVRAAVPLGR-RAEGDKDK 146
VH E R++ +V + + A KIN + A++ P+GR R E K K
Sbjct: 2656 VHLEEK-REQANRVQSESQKAAGKINSLVAEIADLDPIGRSRDELQKQK 2703
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 277 RQREQRYPTEDDER-DPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 417
R++E++ ED ER E R H+ Q A + + + H+++ Q
Sbjct: 249 REQEEKQKNEDRERATQKERREHIERHRQAEARAKALEKEKHEQEEKQ 296
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 277 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQ 390
R++ Y ED++R+ +E+RP R + R H+
Sbjct: 242 RRQYPEYEYEDEDREEMESRPRRRHSNNARGRSTRKHR 279
>U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 34 protein.
Length = 355
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 366 VLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMN 259
V+LWC TY AC + +IIL + +L + ++N
Sbjct: 277 VVLWCYTYTYACM-FLPIIILTSTKIISLQRREKIN 311
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 277 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 417
+Q++QR+P E + P + ++Q+ HQ L +Q Q
Sbjct: 538 QQQQQRHPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQ 584
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 277 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 417
+Q++QR+P E + P + ++Q+ HQ L +Q Q
Sbjct: 538 QQQQQRHPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQ 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,073,787
Number of Sequences: 27780
Number of extensions: 112555
Number of successful extensions: 579
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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