Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1197
(463 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 151 7e-38
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 151 7e-38
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 151 7e-38
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 86 3e-18
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 81 1e-16
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 55 6e-09
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.003
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.003
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 36 0.004
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 35 0.005
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 34 0.012
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 31 0.065
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.11
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.15
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 30 0.20
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 30 0.20
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 1.8
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 26 2.4
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 2.4
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 26 3.2
SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13 |Schizosa... 23 3.4
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 4.3
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 25 4.3
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 25 5.6
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 5.6
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 24 9.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 24 9.8
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 9.8
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 9.8
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 24 9.8
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 151 bits (365), Expect = 7e-38
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 133 bits (321), Expect = 1e-32
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LII GTGEFEAGISK+GQTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLA+TL
Sbjct: 135 EHALLAYTL 143
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 151 bits (365), Expect = 7e-38
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 133 bits (322), Expect = 1e-32
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLII GTGEFEAGISK+GQTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLA+TL
Sbjct: 135 EHALLAYTL 143
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 151 bits (365), Expect = 7e-38
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 133 bits (321), Expect = 1e-32
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LII GTGEFEAGISK+GQTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLA+TL
Sbjct: 135 EHALLAYTL 143
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 85.8 bits (203), Expect = 3e-18
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 227
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 228 AERERGITI 254
ERE+G T+
Sbjct: 296 EEREKGKTV 304
Score = 81.0 bits (191), Expect = 8e-17
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHALL 451
FET +++DAPGH+ ++ NMI G SQAD VL+I+A GEFEAG + GQTREHA+L
Sbjct: 311 FETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVL 370
Query: 452 AFT 460
A T
Sbjct: 371 ART 373
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 80.6 bits (190), Expect = 1e-16
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 227
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 228 AERERGITIILLS 266
ER RG+T+ + S
Sbjct: 235 EERARGVTMDVAS 247
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/65 (53%), Positives = 41/65 (63%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
+A FE+ K I DAPGHRDFI MI G S AD AVL++ + FE G +NGQTR
Sbjct: 245 VASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTR 304
Query: 437 EHALL 451
EHA L
Sbjct: 305 EHAYL 309
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 54.8 bits (126), Expect = 6e-09
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHAL 448
++ET+ + +D PGH D+IKNMITG + D A+++++A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 449 LA 454
LA
Sbjct: 163 LA 164
Score = 39.9 bits (89), Expect = 2e-04
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 221
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 222 LKAERERGITI 254
E+ RGITI
Sbjct: 94 APEEKARGITI 104
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.9 bits (79), Expect = 0.003
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 216 DKLKAERERGITI 254
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
+ V +ID+PGH DF + D A++++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.9 bits (79), Expect = 0.003
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 216 DKLKAERERGITI 254
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
+ V +ID+PGH DF + D A++++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 35.5 bits (78), Expect = 0.004
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 240 RGITI 254
+GITI
Sbjct: 111 KGITI 115
Score = 34.3 bits (75), Expect = 0.009
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREH 442
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 35.1 bits (77), Expect = 0.005
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 427 TVLRDTSFEFTGTGSYDEHSAISLRGSCDHVL--DEIS--VSRSINDGNIVLASFELPES 260
+V+ +T T ++ + +SL SC L DE S SRS N + ++
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 259 NMIVIPRSRSAFSLSKTQAYLKDPLPISWASFSNFSMVRLSIPPH 125
I IP+ A S+ ++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 33.9 bits (74), Expect = 0.012
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 240 RGITI 254
RGITI
Sbjct: 77 RGITI 81
Score = 28.7 bits (61), Expect = 0.46
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
+ +ID PGH DF + + D AV II G
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 31.5 bits (68), Expect = 0.065
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
F+ ++T +D PGH F G + AD VL++ G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.11
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 263 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
++ + Y + +ID PGH DF ++ + + +L++ A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 29.1 bits (62), Expect = 0.35
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 240 RGITI 254
RGIT+
Sbjct: 104 RGITV 108
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.15
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
Y + +ID+PGH DF + + + D A +++ A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.9 bits (64), Expect = 0.20
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 290 YVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
+V+ +D PGH + M+ G + D A+L+I
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 139
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 30 PKMGKEKTHINIVVIGHVDSGKST 101
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.9 bits (64), Expect = 0.20
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 299 IIDAPGHRDFIKNMITGTSQADCAVLII 382
IID PGH F GTS + A+L+I
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.6 bits (56), Expect = 1.8
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = -1
Query: 376 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNMIVIPRSRSAFSLSKTQAYL 197
EH+A+ L S +L IS R N GNI L S + ++ S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 196 KDPLPI 179
K LPI
Sbjct: 62 KALLPI 67
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 302 IDAPGHRDFIKNMITGTSQADCAVLII 382
ID PGH DF+ + + +D VL++
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 2.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 310 SINDGNIVLASFELPESNMIVIPRSRSAFSLSKTQAYLKDPLPISWASFSNFSMVRLSIP 131
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 25.8 bits (54), Expect = 3.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 340 HVLDEISVSRSINDGNIVLASFELPESNMIVIPRSRSAFS 221
+ +D+ SV R +N + + ELPE + + R AFS
Sbjct: 607 YTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFS 646
>SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 370 CAHHNCRYR 396
C HH+CR+R
Sbjct: 292 CCHHHCRWR 300
Score = 21.0 bits (42), Expect(2) = 3.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1
Query: 289 LCYHH*CSW 315
LC HH C W
Sbjct: 291 LCCHHHCRW 299
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.4 bits (53), Expect = 4.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 263 EQYDCDTTLTLSL*FVQDPSIFEGSFTH 180
E Y C LSL VQDP++ + + +H
Sbjct: 133 ETYSCCAQFALSLSNVQDPTVMQINTSH 160
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.4 bits (53), Expect = 4.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 462 RVKASKACSRV*PFLEIPASNSPVPAVM 379
R S +C+R+ P + +P S P P M
Sbjct: 601 RTLQSLSCARIRPLVMVPKSKKPSPDTM 628
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 251 NHIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITA 388
N ++K + + + + PGH D I+++ S LI TA
Sbjct: 192 NDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATA 237
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 5.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 177 PGPPSRTSRWYVCQYHHIC 121
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 7.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKN 337
+T+ID PG DFI N
Sbjct: 89 LTVIDTPGFGDFINN 103
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 346 CDHVLDEISVSRSINDGNIVLASFEL 269
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 24.2 bits (50), Expect = 9.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 376 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNMIVIPRSRS 230
+ +AISL +C LDE + S + + I L S L S+ IV+ ++ S
Sbjct: 519 QRTAISLAANCCKFLDESNASAA--EEIIPLLSNILQSSDTIVVSKAYS 565
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.2 bits (50), Expect = 9.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 210 PKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 94
PK I I++ F P S S C+Y S D W T
Sbjct: 35 PKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 63 IVVIGHVDSGKSTTTGHLIYKC 128
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 66 VVIGHVDSGKSTTTGHLIYKCG 131
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 24.2 bits (50), Expect = 9.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 198 KYAWVL-DKLKAERERGITIILLSGSSKLASTM 293
K +W+L LK+ +GIT I + S KLA T+
Sbjct: 106 KGSWLLVHTLKSSSHKGITGIAVHPSEKLALTV 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,837,644
Number of Sequences: 5004
Number of extensions: 35614
Number of successful extensions: 152
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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