Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1197
(463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 142 1e-34
03_01_0547 + 4093196-4093657,4094267-4095148 142 1e-34
03_01_0544 + 4082528-4082989,4083585-4084466 142 1e-34
03_01_0543 + 4076981-4077442,4078145-4079026 142 1e-34
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 87 6e-18
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 87 6e-18
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 83 8e-17
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 78 4e-15
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 77 7e-15
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 56 2e-08
02_04_0462 + 23131433-23132836 54 7e-08
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.007
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 37 0.007
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 34 0.048
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 33 0.11
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.20
03_05_0511 + 25056018-25059107 32 0.26
02_04_0148 - 20198407-20201424 31 0.34
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.34
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.45
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.45
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 31 0.45
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.79
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 30 1.0
10_08_0016 + 14127200-14127615,14127723-14127816,14127904-141280... 30 1.0
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 30 1.0
01_06_0662 + 30987187-30987277,30987825-30990214 30 1.0
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.0
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.8
01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819 29 2.4
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 4.2
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 28 4.2
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 4.2
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 4.2
01_01_0016 - 88825-90411 28 4.2
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 5.6
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 27 9.7
11_01_0711 - 5839385-5840311,5840815-5841111 27 9.7
07_03_1015 + 23307700-23307906,23309274-23309483,23309915-233100... 27 9.7
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 27 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 142 bits (344), Expect = 1e-34
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 132 bits (318), Expect = 2e-31
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLII + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 142 bits (344), Expect = 1e-34
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 132 bits (318), Expect = 2e-31
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLII + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 142 bits (344), Expect = 1e-34
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 132 bits (318), Expect = 2e-31
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLII + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 142 bits (344), Expect = 1e-34
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 132 bits (318), Expect = 2e-31
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLII + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 87.0 bits (206), Expect = 6e-18
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +3
Query: 51 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 230
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 231 ERERGITI 254
ERERG+T+
Sbjct: 306 ERERGVTM 313
Score = 76.2 bits (179), Expect = 1e-14
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKN---- 424
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L++ A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 425 -GQTREHALL 451
GQT+EHA L
Sbjct: 375 VGQTKEHAQL 384
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 87.0 bits (206), Expect = 6e-18
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +3
Query: 51 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 230
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 231 ERERGITI 254
ERERG+T+
Sbjct: 306 ERERGVTM 313
Score = 76.2 bits (179), Expect = 1e-14
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKN---- 424
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L++ A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 425 -GQTREHALL 451
GQT+EHA L
Sbjct: 375 VGQTKEHAQL 384
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 83.4 bits (197), Expect = 8e-17
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHALL 451
FET TI+DAPGH+ ++ NMI+G SQAD VL+I+A GEFE G + GQTREH LL
Sbjct: 26 FETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLL 85
Query: 452 AFTL 463
A TL
Sbjct: 86 AKTL 89
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 77.8 bits (183), Expect = 4e-15
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +2
Query: 272 FETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTRE 439
FET TI+DAP GH+ ++ NMI+G SQAD VL+I+A GEFE G K GQTRE
Sbjct: 67 FETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTRE 126
Query: 440 HALLAFTL 463
H LLA TL
Sbjct: 127 HVLLAKTL 134
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +3
Query: 84 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 254
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTV 60
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 77.0 bits (181), Expect = 7e-15
Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKN--GQTREHA 445
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L+I A G FEAG+ N GQT+EH+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
Query: 446 LL 451
L
Sbjct: 367 QL 368
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 180 MGKGSFKYAWVLDKLKAERERGITI 254
+GKGSF YAW +D+ ERERGIT+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITM 300
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHAL 448
++ET+K + +D PGH D++KNMITG +Q D +L+++A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 449 LA 454
LA
Sbjct: 177 LA 178
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 191
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 53.6 bits (123), Expect = 7e-08
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHAL 448
++ET + +D PGH D++KNMITG +Q D A+L+++ G QT+EH L
Sbjct: 127 EYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 179
Query: 449 LA 454
LA
Sbjct: 180 LA 181
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 33 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 191
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 240 RGITI 254
RGIT+
Sbjct: 103 RGITV 107
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 275 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
+ Y + +ID PGH DF + + A+L++ A G
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG 170
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 37.1 bits (82), Expect = 0.007
Identities = 43/127 (33%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 240 RGITIILLSGSSKLASTMLP-SLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 416
RGITI L + + P L L+DT S E R +A C L V S+ V
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 181
Query: 417 LRTVKPV 437
+T+ V
Sbjct: 182 AQTLANV 188
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
Y + +ID PGH DF + + + A+L++ A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 34.3 bits (75), Expect = 0.048
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 240 RGITI 254
+GITI
Sbjct: 120 KGITI 124
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTREHAL 448
Y V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 33.1 bits (72), Expect = 0.11
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 54 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 233
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 234 RERGITI 254
+ERGITI
Sbjct: 151 QERGITI 157
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
+K+ + IID PGH DF + D A++ I
Sbjct: 167 NKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
Y I+D PGH +F M AD AVL++ A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.26
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCG 131
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
V +ID+PGH DF + + +D A++++ A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.34
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
V +ID+PGH DF + AD A++++ A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 30.7 bits (66), Expect = 0.60
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 240 RGITI 254
R IT+
Sbjct: 66 RAITM 70
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCG 131
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
+ ++D PGH DF + + AVL++ AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 131
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
++Y + +ID+PGH DF + D A++++
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 131
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
++Y + +ID+PGH DF + D A++++
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 31.1 bits (67), Expect = 0.45
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 132 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIILLSGSSKL 281
G+ I EKE +E+ + AWV+ L A +RGI++I+L G L
Sbjct: 263 GVLNAIIASLEKEDEELAT---EVAWVVVYLSALSDRGISLIVLRGLGNL 309
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
K + + Y + +ID+PGH DF + D A++++
Sbjct: 92 KRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 290 YVTIIDAPGHRDFIKNMITGTSQADCAVLIITA 388
+V+ +D PGH + M+ G + D A+L+I A
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>10_08_0016 +
14127200-14127615,14127723-14127816,14127904-14128033,
14128113-14128245,14128342-14128549,14128683-14128838
Length = 378
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 195 FKYAWVLDKLKAERERGITIILLSGSSKLASTMLP 299
F Y W+ ++++ E+ +G+ I GSSK+ ST P
Sbjct: 332 FTYFWIKEQIEKEKTQGVDIAGY-GSSKVVSTQAP 365
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
+T +D PGH F G + D VL++ A G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 281 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLII 382
++Y + +ID+PGH DF + D A++++
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 299 IIDAPGHRDFIKNMITGTSQADCAVLII 382
+ID PGH+ F G+S D A+L++
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 299 IIDAPGHRDFIKNMITGTSQADCAVLII 382
+ID PGH F G+S D A+L++
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819
Length = 598
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 228 AERERGITIILLSGSSKLASTMLPSLMLLDTEISSR 335
++R R +T + LS S +L LPS+ + EIS R
Sbjct: 60 SKRRRALTALSLSLSPELIRVQLPSVAIAGVEISER 95
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 299 IIDAPGHRDFIKNMITGTSQADCAVLII 382
+ID PGH F G S D AV+++
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 27.9 bits (59), Expect = 4.2
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +3
Query: 123 KCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIILLSGSSK---LASTM 293
KC I + F K+A + W + KLK + + IL GS+ L +T+
Sbjct: 302 KCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILCQGSNDEMLLKTTV 361
Query: 294 LPSLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKL 410
L+ E E LR IALC+ +P+ K+
Sbjct: 362 RRYLIDCLFECDEGDLPDEALRAIALCNQ---MPLRQKI 397
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 48 KTHINIVVIGHVDSG 92
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 415 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 281
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>01_01_0016 - 88825-90411
Length = 528
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 454 SEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 365
+ +G+L L+V+ F+ TGT + D+H A
Sbjct: 249 ARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 415 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 281
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 327 DRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
>11_06_0557 - 24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 313 RSINDGNIVLASFELPESNMIVIPRSRSAFSLSKTQAYLKDPLPISWA 170
RSI DGN+++ F L + + P + SK + + LP + A
Sbjct: 1093 RSIEDGNVMVGCFRLSYNYFYLKPGEVYWYDKSKPYVHSRSNLPAAHA 1140
>11_01_0711 - 5839385-5840311,5840815-5841111
Length = 407
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -1
Query: 409 SFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNMIVIP 242
SF FT SY EH R + V + + V R+ I+ + + +++P
Sbjct: 136 SFRFTEDSSYKEHRVTDKRETSSKVEEALVVGRTAEKRIIISSLSKRMTEETVILP 191
>07_03_1015 +
23307700-23307906,23309274-23309483,23309915-23310085,
23310163-23310286,23310753-23310814,23311185-23311266,
23311870-23312009
Length = 331
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 216 DKLKAERERGITIILLSGSSKLASTM 293
DK+KA RE G+T++ +K+ STM
Sbjct: 297 DKIKALREAGVTVV--ESPAKIGSTM 320
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 189 GSFKYAWVLDKLKAERERGITIILLSGSSKLAS 287
G + W+ DK+ +R GIT++L+ SS LAS
Sbjct: 78 GQLVFGWLGDKMGRKRVYGITLLLMVVSS-LAS 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,654,585
Number of Sequences: 37544
Number of extensions: 258221
Number of successful extensions: 683
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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