Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1197
(463 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 155 2e-40
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 155 2e-40
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 144 3e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 144 3e-37
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.006
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.69
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 3.7
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.5
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 155 bits (376), Expect = 2e-40
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 141 bits (341), Expect = 4e-36
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLI+ AG GEFEAGISKNGQTR
Sbjct: 75 IALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 155 bits (376), Expect = 2e-40
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERERGITI 254
DKLKAERERGITI
Sbjct: 61 DKLKAERERGITI 73
Score = 144 bits (350), Expect = 3e-37
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI+ AGTGEFEAGISKNGQTR
Sbjct: 75 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 134
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 135 EHALLAFTL 143
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 144 bits (350), Expect = 3e-37
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI+ AGTGEFEAGISKNGQTR
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 61
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 62 EHALLAFTL 70
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 144 bits (350), Expect = 3e-37
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTGEFEAGISKNGQTR 436
IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI+ AGTGEFEAGISKNGQTR
Sbjct: 18 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 77
Query: 437 EHALLAFTL 463
EHALLAFTL
Sbjct: 78 EHALLAFTL 86
Score = 37.1 bits (82), Expect = 9e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 207 WVLDKLKAERERGITI 254
WVLDKLKAERERGITI
Sbjct: 1 WVLDKLKAERERGITI 16
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.006
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIITAGTG 397
VT +D PGH FI G D VL++ A G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.30
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKST 101
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.69
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 57 INIVVIGHVDSGKST 101
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 278 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 379
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 278 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 379
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 49 FSLPIFG*SRITNCV 5
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 6.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 439 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 353
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMG 185
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,679
Number of Sequences: 438
Number of extensions: 2698
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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