Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1196
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   3.7  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   4.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.5  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   8.6  

>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +1

Query: 334 TIPNGTGPLSTEEEDERLKQPSGRHRRRCPRNGTPEARRSSHVLEAVPRR 483
           T P G G   T+  D++ + P         R+GT E   S       P+R
Sbjct: 200 TPPKGAGATGTQHSDQQQEPPRPSSPPAIRRSGTLEVTFSERTF-VTPKR 248


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +1

Query: 334 TIPNGTGPLSTEEEDERLKQPSGRHRRRCPRNGTPEARRSSHVLEAVPRR 483
           T P G G   T+  D++ + P         R+GT E   S       P+R
Sbjct: 200 TPPKGAGATGTQHSDQQQELPRPSSPPAIRRSGTLEVTFSERTF-VTPKR 248


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = -3

Query: 143  H*ARNIIFVKTRTYCSLYIFYSTSLTDTACTGVIS 39
            H   NII +    Y S Y      L  TAC G  S
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAGTNS 3136


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 383 RSSSSSVDRGPVPFGIV 333
           ++SS S + GPVP G+V
Sbjct: 213 QNSSDSRNYGPVPIGLV 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,081
Number of Sequences: 2352
Number of extensions: 13030
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)