Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1192
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 34 0.097
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.39
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 31 0.52
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 28 4.8
AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched relat... 28 4.8
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69902-12|CAA93771.2| 525|Caenorhabditis elegans Hypothetical p... 28 6.4
AL033535-2|CAA22132.2| 525|Caenorhabditis elegans Hypothetical ... 28 6.4
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 28 6.4
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 28 6.4
AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (... 28 6.4
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 8.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 8.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 8.4
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 33.9 bits (74), Expect = 0.097
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 189 IQWKPQNTWNAPPKPIQPINTYPKTITPPLKTHTILRIPMHLLKTPIVPPGARLHI---R 359
+ W P T N P PI+ P+T ++LL +P P +LH+
Sbjct: 447 VDWGPHRTKNVP--PIRSATETPETDHRQDDQSVASTSALYLLDSPGPDPSPKLHLTSEE 504
Query: 360 LRLQQLPSQ*SRMKCIMVIMAVTNTSIKSPME 455
L++L ++ SR+ C + + N S+ +PM+
Sbjct: 505 KELKKLKTKLSRI-CKLSLSFTANDSVSTPMQ 535
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 173 EPEPAYPVETSKYVERSTQADPADKHLSQNNYAPPQNSYYPQNTYAPP 316
+ +P P Y + Q P + N++APP ++PQ+ PP
Sbjct: 45 QQQPNLPPPQQPYEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMPP 92
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 191 PVETSKYVERSTQADPADKHLSQNNYAPPQNSY 289
P ET +YV R TQ KHL+ + Y P SY
Sbjct: 86 PEETYRYVNRFTQLSQFWKHLNTSGYGPCIESY 118
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 191 PVETSKYVERSTQADPADKHLSQNNYAPPQNSY 289
P ET +YV R TQ KHL+ + Y P SY
Sbjct: 86 PEETYRYVNRFTQLSQFWKHLNTSGYGPCIESY 118
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 189 IQWKPQNTW-NAPPKPIQPINTYP-KTITPPLKTHTILRIPMHLLKTPIVPPGARLHIRL 362
+Q P T AP P Q + T P I PPL+T LR+P P P +L +
Sbjct: 401 VQMSPLPTAAEAPISPQQNLPTLPLNMIPPPLQTQLPLRVP-PFTGMPFANPALQLFLAT 459
Query: 363 RLQQLP 380
+++ P
Sbjct: 460 QMRMAP 465
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 173 EPEPAYPVETSKYVERSTQADPADKHLSQNNYAP-PQNSYYPQNTYAPPQNTY 328
EPEP E + Q +P + + + P P+ P N+YA P N+Y
Sbjct: 107 EPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKPYNSYAQPHNSY 159
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 389 SLGRELL*SKSDMKACSRWDDRCFEEVHRYSEDSMSF 279
++ RE L S MKA + + R F + +++EDS+SF
Sbjct: 803 TISREELASAMGMKANNEFVKRMFAMIAKHNEDSLSF 839
>AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched related
family protein 4 protein.
Length = 960
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 335 WDDRCFEEVHRYSEDSMSFEGGRNCFGISVYRLDRLGWSVPRI 207
W D H S + EG RN VY+L+ +S+ R+
Sbjct: 626 WADNVMPNFHIMSPPDLRDEGARNRLNELVYKLESTKYSIGRV 668
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 484 ESQYRRGKLVKKGWFSYTGADGKVYTVHYWARQRTGLT 597
+++ + KL+K+GW + + HYW G+T
Sbjct: 617 QTKRKNNKLLKEGWIVHYTDQQNMRKKHYWRLDTKGIT 654
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 484 ESQYRRGKLVKKGWFSYTGADGKVYTVHYWARQRTGLT 597
+++ + KL+K+GW + + HYW G+T
Sbjct: 617 QTKRKNNKLLKEGWIVHYTDQQNMRKKHYWRLDTKGIT 654
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -2
Query: 377 ELL*SKSDMKACSRWDDRCFEEVHRYSEDSMSFEGGRNCFGISVYRLDRLGW 222
+ L + +D C R+D FE+ + ++D ++ G+ C +S+ RL +GW
Sbjct: 150 DALETDTDTFPC-RFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRL--IGW 198
>Z69902-12|CAA93771.2| 525|Caenorhabditis elegans Hypothetical
protein VF13D12L.1 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 285 HTILRIPMHLLKTPIVPPG 341
H++L I LLK P+VPPG
Sbjct: 461 HSVLSILSLLLKAPVVPPG 479
>AL033535-2|CAA22132.2| 525|Caenorhabditis elegans Hypothetical
protein VF13D12L.1 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 285 HTILRIPMHLLKTPIVPPG 341
H++L I LLK P+VPPG
Sbjct: 461 HSVLSILSLLLKAPVVPPG 479
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 484 ESQYRRGKLVKKGWFSYTGADGKVYTVHYWARQRTGLT 597
+++ + KL+K+GW + + HYW G+T
Sbjct: 617 QTKRKNNKLLKEGWIVHYTDQQNMRKKHYWRLDTKGIT 654
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 484 ESQYRRGKLVKKGWFSYTGADGKVYTVHYWARQRTGLT 597
+++ + KL+K+GW + + HYW G+T
Sbjct: 617 QTKRKNNKLLKEGWIVHYTDQQNMRKKHYWRLDTKGIT 654
>AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (grd
related) protein 1 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 188 YPVETSKYVERSTQADPADKHLSQNNYAP---PQNSYYPQNTYAPPQNTYR 331
Y ++ Y + Q PA Q +Y P PQ++ P Y P NTY+
Sbjct: 24 YMCGSANYYQAYAQQQPATATRYQASYIPQQMPQHTSQPMIQYYYPANTYQ 74
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 260 NNYAPPQNSYY-PQNTYAPPQNTY 328
++Y PPQ SY P+++Y P+ TY
Sbjct: 82 SSYGPPQPSYSPPKSSYGRPEPTY 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 560 PSTTGPDKELGLPMLTGGPFTP 625
P T GP GLP +TGGP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 560 PSTTGPDKELGLPMLTGGPFTP 625
P T GP GLP +TGGP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 560 PSTTGPDKELGLPMLTGGPFTP 625
P T GP GLP +TGGP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPP 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,423,225
Number of Sequences: 27780
Number of extensions: 321961
Number of successful extensions: 1240
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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