Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1186
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NED8 Cluster: ENSANGP00000032047; n=3; Culicidae|Rep:...    49   8e-05
UniRef50_Q8SX53 Cluster: RE01745p; n=3; Sophophora|Rep: RE01745p...    48   1e-04
UniRef50_UPI00015B6437 Cluster: PREDICTED: similar to RE01745p; ...    47   4e-04
UniRef50_UPI0000DB7816 Cluster: PREDICTED: similar to CG13676-PA...    46   0.001
UniRef50_UPI0000D56965 Cluster: PREDICTED: similar to CG13676-PA...    45   0.001
UniRef50_Q9LNT7 Cluster: T20H2.10 protein; n=19; Magnoliophyta|R...    33   7.7  

>UniRef50_A0NED8 Cluster: ENSANGP00000032047; n=3; Culicidae|Rep:
           ENSANGP00000032047 - Anopheles gambiae str. PEST
          Length = 757

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 34  VKPNGHGLFSQPRAPPKIKRPVPLSEKGKYEY 129
           VKP+G  ++ +PRA P+I RPVPL+EK KY Y
Sbjct: 359 VKPSGSSIYDRPRAAPRINRPVPLNEKSKYAY 390



 Score = 41.9 bits (94), Expect = 0.013
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 467 QTRKRRD*DESQRSRPTVKVIKRPFLPSRGGSPYLPRG 580
           Q R+    + +  +R  V+  KRPFLPSRGG+PYL RG
Sbjct: 550 QQREPPTTESASTARAPVRSTKRPFLPSRGGNPYLARG 587


>UniRef50_Q8SX53 Cluster: RE01745p; n=3; Sophophora|Rep: RE01745p -
           Drosophila melanogaster (Fruit fly)
          Length = 883

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 21/25 (84%), Positives = 24/25 (96%), Gaps = 1/25 (4%)
 Frame = +2

Query: 509 RPT-VKVIKRPFLPSRGGSPYLPRG 580
           RP+ V+V+KRPFLPSRGGSPYLPRG
Sbjct: 622 RPSSVRVVKRPFLPSRGGSPYLPRG 646



 Score = 40.3 bits (90), Expect = 0.038
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = +1

Query: 55  LFSQPRAPPKIKRPVPLSEKGKYEY 129
           ++++PRAPP+I RPVP++EK K+ Y
Sbjct: 415 VYARPRAPPRIARPVPINEKKKFSY 439


>UniRef50_UPI00015B6437 Cluster: PREDICTED: similar to RE01745p;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           RE01745p - Nasonia vitripennis
          Length = 586

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
 Frame = +1

Query: 4   IPTAPEGQALVKPNG--HGLFSQPRAPPKIKRPVPLSEKGKY 123
           + +A  G+ LVKP      ++++PRAPPK +RPVPL EK KY
Sbjct: 348 VSSAGSGEGLVKPVAPPSSVYARPRAPPKFRRPVPLHEKDKY 389


>UniRef50_UPI0000DB7816 Cluster: PREDICTED: similar to CG13676-PA
           isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG13676-PA isoform 2 - Apis mellifera
          Length = 1035

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
 Frame = +1

Query: 31  LVKPNGHG--LFSQPRAPPKIKRPVPLSEKGKYEY 129
           LVKP      L+++PR PPKI+RPVPLSE+ KY Y
Sbjct: 394 LVKPAAPATSLYARPRTPPKIRRPVPLSEQDKYAY 428



 Score = 40.3 bits (90), Expect = 0.038
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 509 RPTVKVIKRPFLPSRGGSPYLPRGFA 586
           R T++V+KRPFLPSRGG+P  PRG +
Sbjct: 696 RATIRVVKRPFLPSRGGNPN-PRGLS 720


>UniRef50_UPI0000D56965 Cluster: PREDICTED: similar to CG13676-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13676-PA - Tribolium castaneum
          Length = 823

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = +1

Query: 7   PTAPEG---QALVKP-NGHGLFSQPRAPPKIKRPVPLSEKGKYEY 129
           P+APE    + L+KP +G  ++ +PRA PKIK PVP +E  KY Y
Sbjct: 397 PSAPENVGDKPLIKPTSGSSIYDRPRAAPKIKPPVPKNEASKYAY 441



 Score = 43.2 bits (97), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +2

Query: 503 RSRPTVKVIKRPFLPSRGGSPYLPRG 580
           R    ++++KRPFLPSRGG+PY PRG
Sbjct: 600 RPESIIRIVKRPFLPSRGGNPYGPRG 625


>UniRef50_Q9LNT7 Cluster: T20H2.10 protein; n=19; Magnoliophyta|Rep:
           T20H2.10 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 967

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 7   PTAPEGQALVKPNGHGLFSQPRAPPKIKRPVPLSEKGKYE 126
           P +P   +L  PN +  F+QP  PP I  P PLS  G ++
Sbjct: 95  PPSPPATSL-NPNSYSTFNQPPPPPTI-HPQPLSSYGSFD 132


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,989,423
Number of Sequences: 1657284
Number of extensions: 10281327
Number of successful extensions: 27703
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27671
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)