Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1186
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p pro...    48   8e-06
AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-P...    48   8e-06

>AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p
           protein.
          Length = 883

 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%), Gaps = 1/25 (4%)
 Frame = +2

Query: 509 RPT-VKVIKRPFLPSRGGSPYLPRG 580
           RP+ V+V+KRPFLPSRGGSPYLPRG
Sbjct: 622 RPSSVRVVKRPFLPSRGGSPYLPRG 646



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = +1

Query: 55  LFSQPRAPPKIKRPVPLSEKGKYEY 129
           ++++PRAPP+I RPVP++EK K+ Y
Sbjct: 415 VYARPRAPPRIARPVPINEKKKFSY 439


>AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-PA
           protein.
          Length = 883

 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%), Gaps = 1/25 (4%)
 Frame = +2

Query: 509 RPT-VKVIKRPFLPSRGGSPYLPRG 580
           RP+ V+V+KRPFLPSRGGSPYLPRG
Sbjct: 622 RPSSVRVVKRPFLPSRGGSPYLPRG 646



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = +1

Query: 55  LFSQPRAPPKIKRPVPLSEKGKYEY 129
           ++++PRAPP+I RPVP++EK K+ Y
Sbjct: 415 VYARPRAPPRIARPVPINEKKKFSY 439


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,574,469
Number of Sequences: 53049
Number of extensions: 481043
Number of successful extensions: 1469
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)