Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1183
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 34 0.013
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 31 0.091
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 31 0.16
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 30 0.28
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 30 0.28
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 29 0.37
SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr 2|... 29 0.64
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 28 0.85
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.85
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 28 1.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.1
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 27 1.5
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 27 1.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.0
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 2.0
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 3.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.4
SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 26 3.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 3.4
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 4.5
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.5
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 4.5
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 26 4.5
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 4.5
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 26 4.5
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 6.0
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 6.0
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 6.0
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 25 6.0
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 25 7.9
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 34.3 bits (75), Expect = 0.013
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 297 QCLKEKNVR-TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSD 473
Q L+EK ++ T ++ + +L + E E P + + + +KN + + PK++ D
Sbjct: 184 QYLEEKTIKDTVKKHSEFISYPIQLVVTREVEKEVP-EEEETEEVKNEEDDKAPKIEEVD 242
Query: 474 TATQMETMKTKNVRK 518
++ + KTK V++
Sbjct: 243 DESEKKEKKTKKVKE 257
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 31.5 bits (68), Expect = 0.091
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -3
Query: 455 RCLRGLGIF*RLVVIV*G--WRLIFTAVWNIQFEHVV--LRRCIYGCCSDVLFFQTLF 294
R L +F + +I+ G + ++T + + +++ L IYGCC ++FF L+
Sbjct: 580 RVLAAFAVFEAVALIIRGPIYAFVYTESMKVSYPNMIFFLSAVIYGCCFIIIFFMRLY 637
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 30.7 bits (66), Expect = 0.16
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 481 VAVSLVFTLGVCVDLVFFKDWLSLSE 404
V +S +F LG VDL+ K WL LS+
Sbjct: 210 VVLSYIFVLGKAVDLLQIKQWLQLSK 235
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 29.9 bits (64), Expect = 0.28
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 384 SENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKN 509
SEN+T S+ND S +T S + + SDT+ + + + N
Sbjct: 352 SENDTTESENDTLSESSTTSISSSPSENSDTSDDLTKVDSPN 393
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 29.9 bits (64), Expect = 0.28
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 372 IPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKN 509
+P + TPT+ N NQ+L+N ++ + A Q+E + N
Sbjct: 81 VPPAGNTNTPTTSNSNQNLENNVTSAASMPAILNAAGQLEFSPSTN 126
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 29.5 bits (63), Expect = 0.37
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 381 SSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKNVRKA*KRDGICMM--VH 554
S E+E+ DN+N+ + KS TSD + ++N++KA K G M +
Sbjct: 57 SVESESEELDNENEDERVQKSVNLNASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQ 116
Query: 555 ERCLLP 572
+R + P
Sbjct: 117 KRSIPP 122
>SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 28.7 bits (61), Expect = 0.64
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 327 TSINASSQNNVFELNIPHSSENETPTSD-NDNQSLKNTKSTQTPKVKTSDTATQME 491
TSI+ S NN+ EL++ P D N S+ T + +TP T+ +E
Sbjct: 2 TSIHTGSNNNIVELDMSELIRPIPPVLDMNKVNSMMETMTGKTPPASCGLTSEDLE 57
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 0.85
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQM 488
E+ +RT SI +++N + E EN D + K TKS + KTS + +
Sbjct: 178 EQPLRTLSIEMAAKNALKEAK----RENAKVPKDVSKKEAKTTKSKEKATKKTSSSVPKQ 233
Query: 489 ETMKTKNVRKA*K 527
T +N +KA K
Sbjct: 234 ST--GENTKKAVK 244
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 28.3 bits (60), Expect = 0.85
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKT--SDTAT 482
K+ TTS + S +N + P TP DN++ S+ +K + ++ +DTAT
Sbjct: 398 KDAATTSSSFESYHNTQTIQSPMKFTKATPLKDNESASVDESKVNVLSENQSLQADTAT 456
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 336 NASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKNVR 515
N + V N+ S + P+SD++ S++NT + K + +A + + K +R
Sbjct: 146 NKDDSSAVKSANVSFPSSSTPPSSDSNFSSIQNTDLNTSIKFTENISANAIHVNQDKVIR 205
Query: 516 KA 521
A
Sbjct: 206 SA 207
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 309 EKNVRTTSI---NASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTA 479
+KN TS+ N S+ N F +N P + PT + + + T P T+ T
Sbjct: 496 KKNTPETSVVSKNLSTFNGKFNVNAPVFTPRSFPTKPFSATDISSVQPTNLPNGSTNGTE 555
Query: 480 T 482
T
Sbjct: 556 T 556
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 200 KLSNNCIFDDCKLELEDCSSIIPSCPKLVVTNFRIIFYTD 81
KL + + D ++ + ++I+ CP L+ N IFY D
Sbjct: 321 KLISLELTDTARIHVSVINAIVDCCPNLISLNLSRIFYLD 360
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMET 494
+V +T+ + S ++ + P + +NE ++++DN L+N T+ VK SD ++ +
Sbjct: 172 DVNSTTSSPSEVGSLDKAGGPLNQQNENLSAESDNTILQN--GTRKSSVKMSDLGKRIAS 229
Query: 495 M 497
+
Sbjct: 230 L 230
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 303 LKEKNVRTTSINASSQNNVF-ELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTA 479
+K+K + S N+ +++NV E N ++ NE PT +++ Q ++NT+ V +++ A
Sbjct: 18 VKKKKRQAKSKNSVAEDNVDRESNDGNNQVNE-PTGNDNTQVVENTEDISASNVVSAEGA 76
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 269 EERCHKKIKTMFERKERQNNIHKCIFSKQ 355
EE C KI+T+ KE I CI SKQ
Sbjct: 143 EEICADKIETVESEKELIKAIRTCISSKQ 171
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 300 CLKEKNVRTTSINASSQNNVFELNIP 377
CL N+ SIN S++NNVF LNIP
Sbjct: 1108 CLASPNL-PPSIN-SNRNNVFYLNIP 1131
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQ 485
++NV T IN Q N S N N+N+SLK Q + T Q
Sbjct: 64 KENVLTKKINFLEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTENQ 122
>SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 417 NQSLKNTKSTQTPKVKTSDTATQMETMKTKNVRKA*KR 530
+Q K + K+KT AT +T TKN+R K+
Sbjct: 8 SQKRKLEEINNQKKIKTKKKATGQQTSNTKNLRDVKKK 45
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPK 458
K+ +TS + Q+N + P E P+ + NQ + + TP+
Sbjct: 481 KDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPR 529
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKT 503
T ++ S F +IP + + + + + L T ST T V T+ TAT ++ T
Sbjct: 245 TLPVSTSEATVSFSTDIPATPSTLSSPASSSSSYLVETSSTLTDSVFTTVTATSDSSVIT 304
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 4.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 312 KNVRTTSINASSQNNV-FELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQM 488
K RT I N + +LN+ S NE+ ++N + T Q + + Q
Sbjct: 214 KKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNNQIKTLKAQNLNIHKNFQKIQS 273
Query: 489 ETMKTKNVRKA*KRDGICMMVHERCLL 569
E ++T + + K++ + V LL
Sbjct: 274 ELIQTNSGLYSTKKELSALQVRYATLL 300
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 25.8 bits (54), Expect = 4.5
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPH----SSENETPTSDND-------NQSLKNTKSTQTP 455
+ +V + N S+ +N+ + N S+EN TP N N+SL + KST P
Sbjct: 482 KNSVLSIGNNHSNHSNIIKPNTYKNTILSNENNTPNYSNVCLSTSLINRSLPSLKSTMHP 541
Query: 456 KVKTSDTATQMETMKTKNVRKA 521
V + + +VRKA
Sbjct: 542 GVNKDLITRPFKNVNKMSVRKA 563
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 4.5
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 158 LEDCSSIIPSCPKLVVTNFRIIFYTDS 78
LE+C + SC ++ + F+ +F+T +
Sbjct: 227 LENCECLCVSCERMGINGFKKLFHTSA 253
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 4.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 524 LGFPHIFCFHCL 489
LG H+FC HCL
Sbjct: 373 LGCSHVFCLHCL 384
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQT 452
E+ + T N SQN E ET + D+ NTKS T
Sbjct: 170 ERELHTLRQNTPSQNEQAEATPSKEIPRETVSEKADHPPSSNTKSVST 217
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 336 NASSQNNVFELNIPHSSENETPTSDNDNQSLKN 434
N+ S+N FE PH + + TP S KN
Sbjct: 604 NSVSRNTHFESKSPHPNYSRTPHETYSKASSKN 636
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 6.0
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 342 SSQNNVFEL-NIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSD 473
+S + EL NIP S N + D ++LKN T D
Sbjct: 487 NSDKGISELINIPFVSANNSMADDEKGRNLKNLTQISTSSTPAHD 531
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 6.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 375 PHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTAT 482
P+S+ + TS DN+ + +T P TS TAT
Sbjct: 315 PNSAFTKPATSTGDNKPTFSFGNTSKPTENTSTTAT 350
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 6.0
Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -2
Query: 438 WYFLKIGCH-CLRLASH 391
WY++K+G + CLRL H
Sbjct: 336 WYYMKLGLNCCLRLGLH 352
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 402 TSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTK 506
+SD+D+ S N ++ TPK +S + + KTK
Sbjct: 1063 SSDSDSDSEDNFLASLTPKTNSSSISIENLPRKTK 1097
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,333,961
Number of Sequences: 5004
Number of extensions: 47462
Number of successful extensions: 210
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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