Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1183
(577 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 3.1
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 3.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 4.1
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 4.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 4.1
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 5.4
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 7.1
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 7.1
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 23 7.1
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.4
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 23 9.4
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.2 bits (50), Expect = 3.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 191 NNCIFD-DCKLELEDCSSIIPSCPKL 117
NNC + + KL LE+C ++ PKL
Sbjct: 364 NNCELECEAKLILENCGCVLYYLPKL 389
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 24.2 bits (50), Expect = 3.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 191 NNCIFD-DCKLELEDCSSIIPSCPKL 117
NNC + + KL LE+C ++ PKL
Sbjct: 364 NNCELECEAKLILENCGCVLYYLPKL 389
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 4.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQS 425
++ R + NASS N+ N ++ N T +S+N+N +
Sbjct: 186 RDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNN 223
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 4.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQS 425
++ R + NASS N+ N ++ N T +S+N+N +
Sbjct: 186 RDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNN 223
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.8 bits (49), Expect = 4.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQS 425
++ R + NASS N+ N ++ N T +S+N+N +
Sbjct: 138 RDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNN 175
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQS 425
++ R + NASS N+ N ++ N T +S+N+N +
Sbjct: 186 RDERDSLPNASSNNSNNNNNSSGNNNNNTISSNNNNNN 223
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.0 bits (47), Expect = 7.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 212 REIRKLSNNCIFDDCKLELEDCSSIIPSCPKLVV 111
REI L DC+ L CS + + P++ +
Sbjct: 58 REIDPLGARATSVDCRTSLAPCSKLFAAEPRVAL 91
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 7.1
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 306 KEKNVRTTS-INASSQNNVFELNIPHSSENE-TPTSDNDNQSLKNTKSTQTPKVKTSDTA 479
K K + S + +S +N + + H + D+D S+K+ S + K
Sbjct: 1151 KNKQIMNNSKVIGNSISNHQDNKLDHELNHRGVSLQDDDTASIKSYGSHKNRPFKDESHK 1210
Query: 480 TQMETMKTKNVRKA*KRD 533
ETM+ + R A K D
Sbjct: 1211 GSAETMEGEEKRDASKED 1228
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 23.0 bits (47), Expect = 7.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 488 HLCRSIACFYFR 453
HL RSI CF++R
Sbjct: 117 HLSRSIPCFFWR 128
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 9.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 435 TKSTQTPKVKTSDTATQMETMKTKNV 512
TKST TPK T AT T + N+
Sbjct: 478 TKSTHTPKSITYKGATSANTNEMCNL 503
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 22.6 bits (46), Expect = 9.4
Identities = 10/49 (20%), Positives = 23/49 (46%)
Frame = -1
Query: 517 FLTFFVFIVSICVAVSLVFTLGVCVDLVFFKDWLSLSEVGVSFSLLCGI 371
F T + F IC+ + + TL + + D + ++G++ + C +
Sbjct: 226 FSTCYTFTF-ICLYLFFIITLSIYGLMSQISDGFGVKDIGLAVTAFCSV 273
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,598
Number of Sequences: 2352
Number of extensions: 11198
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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