Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1179
         (237 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    38   0.001
AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA ...    28   2.0  
AY122141-1|AAM52653.1|  309|Drosophila melanogaster GM25741p pro...    27   3.5  
AE014298-2219|AAO41658.1|  919|Drosophila melanogaster CG33172-P...    27   3.5  
AE014298-1862|AAF48239.1|  301|Drosophila melanogaster CG2453-PA...    27   3.5  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 20 APAAALELVDPPGCRNSA 73
          A AAALELVDPPGCRNSA
Sbjct: 5  AVAAALELVDPPGCRNSA 22


>AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA
           protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 118 NLKQKYTTYYNHPHSVS 168
           +L Q YTT Y+HPHS S
Sbjct: 47  SLSQHYTTPYHHPHSHS 63


>AY122141-1|AAM52653.1|  309|Drosophila melanogaster GM25741p
           protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 120 VLEEAYRVLKPGG 82
           VL EAYRVL+PGG
Sbjct: 210 VLSEAYRVLQPGG 222


>AE014298-2219|AAO41658.1|  919|Drosophila melanogaster CG33172-PA
           protein.
          Length = 919

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 184 IELTPYLQSGGDYNMWYIFVLGFR 113
           ++  PY  +GGD + W +F +G R
Sbjct: 638 LQAIPYKSNGGDSSTWLVFSVGGR 661


>AE014298-1862|AAF48239.1|  301|Drosophila melanogaster CG2453-PA
           protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 120 VLEEAYRVLKPGG 82
           VL EAYRVL+PGG
Sbjct: 202 VLSEAYRVLQPGG 214


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,946,244
Number of Sequences: 53049
Number of extensions: 194465
Number of successful extensions: 593
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)