Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1177
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.13 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.2  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 364 SSNAFRFEGWGSRCNYTETSELISQGGWRIYIVDVHGSSNHLTPG 230
           + N+ ++ G      Y E  EL  +GGW++ + D    + H+  G
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV-VWDDTQKNTHMYKG 327


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -3

Query: 81  LMKGHQIFITSIEHSVIKCGY 19
           L  GH++  +++ H  + CG+
Sbjct: 449 LSHGHRVIYSTVGHWYLDCGF 469


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 557 VALPEPPNPH 586
           V LP PP+PH
Sbjct: 733 VKLPPPPHPH 742


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 557 VALPEPPNPH 586
           V LP PP+PH
Sbjct: 625 VKLPPPPHPH 634


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 217 DLTAHLVLSGYWSH 258
           DLT H++L   W H
Sbjct: 277 DLTTHVMLLSDWMH 290


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 217 DLTAHLVLSGYWSH 258
           DLT H++L   W H
Sbjct: 277 DLTTHVMLLSDWMH 290


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 176 KLEKFFF*CLDGWTISQPTW 235
           KL  FF   L  W +  PT+
Sbjct: 11  KLNTFFLKALTVWHVENPTY 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,631
Number of Sequences: 336
Number of extensions: 3063
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)