Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1177
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.9  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   3.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   3.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   4.5  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 378 YFSREAVTRFGLKGGAAVVTILRPQN 301
           +FS    TR   K G+++VT+  PQN
Sbjct: 195 HFSASLSTRLSKKCGSSIVTLDLPQN 220


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 536 AKPQTPWVALPEPPNP 583
           + PQ+P+ ALPE P P
Sbjct: 225 SNPQSPYGALPETPPP 240


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 576 GGSGNATHGVCGFAS 532
           GG+G  +HG CG AS
Sbjct: 351 GGTGCGSHGCCGGAS 365


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 576 GGSGNATHGVCGFAS 532
           GG+G  +HG CG AS
Sbjct: 351 GGTGCGSHGCCGGAS 365


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 549 VCGFASFLCYVSSKWSAYVVILPEQKHHCIS*NTVGTHSYLVVGPLVS 406
           +C F   + Y+SS  S+ +   P       +   V  H+Y +  P+VS
Sbjct: 77  LCAFLLLVLYISSSPSSLLSDGPRTNSFLRTSAIVYNHTYPLTSPIVS 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,304
Number of Sequences: 2352
Number of extensions: 12217
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)